Regulon of NtrC in Geobacter sulfurreducens PCA

Properties
Regulator type:	Transcription factor
TF locus tag:	GSU1003
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Desulfuromonadales
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 56 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -266 Score: 4.4 Sequence: TGCCTGATAATTGTGCT Position: -253 Score: 4.1 Sequence: TGCTCATTTGGTATGCA Locus tag: GSU1836 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: GSU1835 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	GSU1836	glnB	Nitrogen regulatory protein P-II
	GSU1835	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -215 Score: 5.1 Sequence: TGCATAAAAAATGAGCA Locus tag: GSU2806 Name: nifEN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein
	GSU2806	nifEN	Nitrogenase FeMo-cofactor scaffold and assembly protein
Position: -41 Score: 5.2 Sequence: TGCCTAAATTTTAAGCA Locus tag: GSU1005 Name: nifR Funciton: Predicted oxidoreductase, FAD binding Locus tag: GSU1004 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: GSU1003 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	GSU1005	nifR	Predicted oxidoreductase, FAD binding
	GSU1004	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	GSU1003	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -151 Score: 4.8 Sequence: TGCCGATAAATCAGGCA Position: -110 Score: 4.5 Sequence: TGCACAGTTTTGGTGCA Position: -88 Score: 4.8 Sequence: TGCATAAAATGCAGGCA Locus tag: GSU1305 Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
	GSU1305	gdhA	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Position: -329 Score: 5.3 Sequence: TGCATAAATAATGGGCA Locus tag: GSU0938 Name: Gmet_0693 Funciton: Conserved hypothetical protein Locus tag: GSU0939 Name: glnK1 Funciton: Nitrogen regulatory protein P-II Locus tag: GSU0940 Name: amtB Funciton: Ammonium transporter
	GSU0938	Gmet_0693	Conserved hypothetical protein
	GSU0939	glnK1	Nitrogen regulatory protein P-II
	GSU0940	amtB	Ammonium transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD