Regulon of NtrC in Geobacter metallireducens GS-15
| Regulator type: | Transcription factor |
| TF locus tag: | Gmet_2563 |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Regulog: | NtrC - Desulfuromonadales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfuromonadales
- By trascription factor - NtrC
- By TF family - Fis
- By effector - Phosphorylated NtrB, signal histidine kinase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -259
Score: 4.3 Sequence: TGCTTCTGATTTGTGCA
Locus tag: Gmet_1351
Name: glnB Funciton: Nitrogen regulatory protein P-II
Locus tag: Gmet_1352
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnB
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Nitrogen regulatory protein P-II
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -46
Score: 5 Sequence: TGCTTAAATTTTAAGCA
Locus tag: Gmet_2561
Name: nifR Funciton: Predicted oxidoreductase, FAD binding
Locus tag: Gmet_2562
Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Gmet_2563
Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family |
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nifR
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Predicted oxidoreductase, FAD binding
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ntrB
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Nitrogen regulation protein NR(II) (EC 2.7.3.-)
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ntrC
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Nitrogen regulation protein NR(I), Fis family
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Position: -349
Score: 5 Sequence: TGCTTATATAATGTGCA
Locus tag: Gmet_0693
Name: Gmet_0693 Funciton: Conserved hypothetical protein
Locus tag: Gmet_0694
Name: glnK1 Funciton: Nitrogen regulatory protein P-II
Locus tag: Gmet_0695
Name: amtB Funciton: Ammonium transporter |
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Gmet_0693
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Conserved hypothetical protein
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glnK1
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Nitrogen regulatory protein P-II
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amtB
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Ammonium transporter
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Position: -217
Score: 4.9 Sequence: TGCATAAAATGTGTGCA
Locus tag: Gmet_0669
Name: nifEN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein |
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nifEN
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Nitrogenase FeMo-cofactor scaffold and assembly protein
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Position: -152
Score: 4.5 Sequence: TGCCGCAAATTCGGGCA
Locus tag: Gmet_1186
Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
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gdhA
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NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |