Regulon of NtrC in Geobacter metallireducens GS-15

Properties
Regulator type:	Transcription factor
TF locus tag:	Gmet_2563
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Desulfuromonadales
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 56 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -259 Score: 4.3 Sequence: TGCTTCTGATTTGTGCA Locus tag: Gmet_1351 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Gmet_1352 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Gmet_1351	glnB	Nitrogen regulatory protein P-II
	Gmet_1352	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -46 Score: 5 Sequence: TGCTTAAATTTTAAGCA Locus tag: Gmet_2561 Name: nifR Funciton: Predicted oxidoreductase, FAD binding Locus tag: Gmet_2562 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Gmet_2563 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Gmet_2561	nifR	Predicted oxidoreductase, FAD binding
	Gmet_2562	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Gmet_2563	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -349 Score: 5 Sequence: TGCTTATATAATGTGCA Locus tag: Gmet_0693 Name: Gmet_0693 Funciton: Conserved hypothetical protein Locus tag: Gmet_0694 Name: glnK1 Funciton: Nitrogen regulatory protein P-II Locus tag: Gmet_0695 Name: amtB Funciton: Ammonium transporter
	Gmet_0693	Gmet_0693	Conserved hypothetical protein
	Gmet_0694	glnK1	Nitrogen regulatory protein P-II
	Gmet_0695	amtB	Ammonium transporter
Position: -217 Score: 4.9 Sequence: TGCATAAAATGTGTGCA Locus tag: Gmet_0669 Name: nifEN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein
	Gmet_0669	nifEN	Nitrogenase FeMo-cofactor scaffold and assembly protein
Position: -152 Score: 4.5 Sequence: TGCCGCAAATTCGGGCA Locus tag: Gmet_1186 Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
	Gmet_1186	gdhA	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD