Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Phenylobacterium zucineum HLK1

Properties
Regulator type: Transcription factor
TF locus tag: PHZ_c1730
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Caulobacterales
Statistics of regulated genes:
- Genes 9
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -140
Score: 4.1
Sequence: CGCCCATTCCTTAGGCG
Locus tag: PHZ_c1573
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: PHZ_c1572
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB
Nitrogen regulatory protein P-II
glnA
Glutamine synthetase type I (EC 6.3.1.2)

Position: -211
Score: 4
Sequence: TGCACAGAAATCGGGCG
Locus tag: PHZ_c1361
Name: glnK
Funciton: nitrogen regulatory protein P-II
glnK
nitrogen regulatory protein P-II

Position: -10
Score: 4.6
Sequence: TGATTAGAAAATGAGCA
Locus tag: PHZ_c1732
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: PHZ_c1731
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: PHZ_c1730
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: PHZ_c1729
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: PHZ_c1728
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: PHZ_c1727
Name: dat
Funciton: D-alanine aminotransferase (EC 2.6.1.21)
nifR3
Nitrogen assimilation transcriptional regulator NtrX, Fis family
ntrB
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
ntrC
Nitrogen regulation protein NR(I), Fis family
ntrY
Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
ntrX
Nitrogen assimilation transcriptional regulator NtrX, Fis family
dat
D-alanine aminotransferase (EC 2.6.1.21)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD