Regulon of NtrC in Caulobacter sp. K31

Properties
Regulator type:	Transcription factor
TF locus tag:	Caul_2606
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Caulobacterales
Statistics of regulated genes:
- Genes	15
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 15 sites [see more]

Member of regulog collections

By taxonomy - Caulobacterales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -235 Score: 4.1 Sequence: TGCTCATGCATCGTGCA Position: -211 Score: 3.8 Sequence: TGCCTGTTTGCTGAGCA Locus tag: Caul_2957 Name: narK Funciton: Nitrate/nitrite antiporter Locus tag: Caul_2956 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Caul_2955 Name: nasE Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Nitrite reductase, small subunit (EC 1.7.1.4) Locus tag: Caul_2954 Name: nasA Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4) Locus tag: Caul_2953 Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
	Caul_2957	narK	Nitrate/nitrite antiporter
	Caul_2956	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Caul_2955	nasE	Nitrite reductase, large subunit (EC 1.7.1.4) Nitrite reductase, small subunit (EC 1.7.1.4)
	Caul_2954	nasA	Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
	Caul_2953	cysG	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Position: -141 Score: 4.3 Sequence: TGCTCAAATTCCAGGCA Locus tag: Caul_2852 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Caul_2853 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Caul_2852	glnB	Nitrogen regulatory protein P-II
	Caul_2853	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -201 Score: 4.9 Sequence: CGCCCAATATTTGGGCG Locus tag: Caul_2171 Name: glnK Funciton: nitrogen regulatory protein P-II Locus tag: Caul_2170 Name: amtB Funciton: Ammonium transporter
	Caul_2171	glnK	nitrogen regulatory protein P-II
	Caul_2170	amtB	Ammonium transporter
Position: -10 Score: 4.9 Sequence: TGCATATAAAATGAGCA Locus tag: Caul_2604 Name: nifR3 Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family Locus tag: Caul_2605 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Caul_2606 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family Locus tag: Caul_2607 Name: ntrY Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-) Locus tag: Caul_2608 Name: ntrX Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family Locus tag: Caul_2609 Name: dat Funciton: D-alanine aminotransferase (EC 2.6.1.21)
	Caul_2604	nifR3	Nitrogen assimilation transcriptional regulator NtrX, Fis family
	Caul_2605	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Caul_2606	ntrC	Nitrogen regulation protein NR(I), Fis family
	Caul_2607	ntrY	Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
	Caul_2608	ntrX	Nitrogen assimilation transcriptional regulator NtrX, Fis family
	Caul_2609	dat	D-alanine aminotransferase (EC 2.6.1.21)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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