Regulon of NtrC in Sphingobium japonicum UT26S

Properties
Regulator type:	Transcription factor
TF locus tag:	SJA_C1-16730
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Sphingomonadales
Statistics of regulated genes:
- Genes	9
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 25 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -150 Score: 5.6 Sequence: TGCCTAATTTTTGAGCA Position: -121 Score: 4.3 Sequence: TGCCCATTTTTTCAGCG Locus tag: SJA_C1-01910 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: SJA_C1-01900 Name: amtB Funciton: Ammonium transporter
	SJA_C1-01910	glnK	Nitrogen regulatory protein P-II
	SJA_C1-01900	amtB	Ammonium transporter
Position: -230 Score: 5.7 Sequence: TGCCTAAAAAATGGGCA Position: -199 Score: 4.1 Sequence: TGCCCGGAATCCGGGCA Locus tag: SJA_C1-19360 Name: glnB Funciton: Glutamate synthase, large chain (EC 1.4.1.13) Locus tag: SJA_C1-19370 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	SJA_C1-19360	glnB	Glutamate synthase, large chain (EC 1.4.1.13)
	SJA_C1-19370	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -28 Score: 5.5 Sequence: TGCCTGTTTTTTAGGCA Locus tag: SJA_C1-16750 Name: nifR3 Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family Locus tag: SJA_C1-16740 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: SJA_C1-16730 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family Locus tag: SJA_C1-16720 Name: ntrY Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-) Locus tag: SJA_C1-16710 Name: ntrXY Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
	SJA_C1-16750	nifR3	Nitrogen assimilation transcriptional regulator NtrX, Fis family
	SJA_C1-16740	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	SJA_C1-16730	ntrC	Nitrogen regulation protein NR(I), Fis family
	SJA_C1-16720	ntrY	Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
	SJA_C1-16710	ntrXY	Nitrogen assimilation transcriptional regulator NtrX, Fis family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD