Regulon of NtrC in Novosphingobium aromaticivorans DSM 12444

Properties
Regulator type:	Transcription factor
TF locus tag:	Saro_1928
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Sphingomonadales
Statistics of regulated genes:
- Genes	9
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 25 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -207 Score: 3.7 Sequence: TGCCCGGAAACGAAGCA Position: -182 Score: 5.8 Sequence: TGCTTAAAATTTAGGCA Locus tag: Saro_0693 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: Saro_0694 Name: amtB Funciton: Ammonium transporter
	Saro_0693	glnK	Nitrogen regulatory protein P-II
	Saro_0694	amtB	Ammonium transporter
Position: -28 Score: 5.5 Sequence: TGCCTGTTTTTTAGGCA Locus tag: Saro_1926 Name: nifR3 Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family Locus tag: Saro_1927 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Saro_1928 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family Locus tag: Saro_1929 Name: ntrY Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-) Locus tag: Saro_1930 Name: ntrXY Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
	Saro_1926	nifR3	Nitrogen assimilation transcriptional regulator NtrX, Fis family
	Saro_1927	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Saro_1928	ntrC	Nitrogen regulation protein NR(I), Fis family
	Saro_1929	ntrY	Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
	Saro_1930	ntrXY	Nitrogen assimilation transcriptional regulator NtrX, Fis family
Position: -265 Score: 5.5 Sequence: TGCCTAAAAATAAGGCA Position: -243 Score: 4.9 Sequence: TGCGTAAAATTTGTGCA Locus tag: Saro_1109 Name: glnB Funciton: Glutamate synthase, large chain (EC 1.4.1.13) Locus tag: Saro_1108 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Saro_1109	glnB	Glutamate synthase, large chain (EC 1.4.1.13)
	Saro_1108	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD