Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Sulfitobacter sp. EE-36

Properties
Regulator type: Transcription factor
TF locus tag: EE36_15007
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Rhodobacterales
Statistics of regulated genes:
- Genes 24
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 92 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -252
Score: 3.9
Sequence: TGCCAAAAAATGAGGCG
Locus tag: EE36_10385
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: EE36_10390
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: EE36_10395
Name: urtB
Funciton: Urea ABC transporter, permease component 2
Locus tag: EE36_10400
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: EE36_10405
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 1
EE36_10385
urtA
Urea ABC transporter, substrate-binding component
EE36_10390
urtB
Urea ABC transporter, permease component 1
EE36_10395
urtB
Urea ABC transporter, permease component 2
EE36_10400
urtD
Urea ABC transporter, ATP-binding component 1
EE36_10405
urtE
Urea ABC transporter, ATP-binding component 1
Position: -130
Score: 4.6
Sequence: TGATTAAAATTTGTGCG
Locus tag: EE36_02983
Name: gdhA
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
EE36_02983
gdhA
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Position: -158
Score: 3.9
Sequence: TGCACAGATTTTAATCG
Locus tag: EE36_12708
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: EE36_12698
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
EE36_12708
glnB
Nitrogen regulatory protein P-II
EE36_12698
glnA
Glutamine synthetase type I (EC 6.3.1.2)
Position: -111
Score: 5.3
Sequence: TGCCTAAATTTTAGGCA
Position: -18
Score: 4.5
Sequence: TGCACAAGGATTAAGCG
Locus tag: EE36_14997
Name: nifR3
Funciton: Predicted oxidoreductase, FAD binding
Locus tag: EE36_15002
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: EE36_15007
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: EE36_15012
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: EE36_15017
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
EE36_14997
nifR3
Predicted oxidoreductase, FAD binding
EE36_15002
ntrB
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
EE36_15007
ntrC
Nitrogen regulation protein NR(I), Fis family
EE36_15012
ntrY
Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
EE36_15017
ntrX
Nitrogen assimilation transcriptional regulator NtrX, Fis family
Position: -93
Score: 5.2
Sequence: TGCTCAAATATTAGGCA
Locus tag: EE36_08503
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: EE36_08498
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: EE36_08488
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: EE36_08483
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: EE36_08478
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: EE36_08473
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: EE36_08468
Name: ureG
Funciton: Urease accessory protein, UreG
EE36_08503
ureD
Urease accessory protein, UreD
EE36_08498
ureA
Urease, gamma subunit (EC 3.5.1.5)
EE36_08488
ureB
Urease, beta subunit (EC 3.5.1.5)
EE36_08483
ureC
Urease, alpha subunit (EC 3.5.1.5)
EE36_08478
ureE
Urease accessory protein, UreE
EE36_08473
ureF
Urease accessory protein, UreF
EE36_08468
ureG
Urease accessory protein, UreG
Position: -90
Score: 3.9
Sequence: TGCTCACTGTTTGGGCT
Locus tag: EE36_07968
Name: nasT
Funciton: Nitrogen assimilation attenuator protein NasT
Locus tag: EE36_07973
Name: nrtA2
Funciton: Nitrate ABC transporter, substrate-binding component
EE36_07968
nasT
Nitrogen assimilation attenuator protein NasT
EE36_07973
nrtA2
Nitrate ABC transporter, substrate-binding component
Position: -164
Score: 5.1
Sequence: CGCCCAATAATTGGGCA
Position: -135
Score: 4.8
Sequence: CGCCCAATAATCAGGCA
Locus tag: EE36_08228
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: EE36_08223
Name: amtB
Funciton: Ammonium transporter
EE36_08228
glnK
Nitrogen regulatory protein P-II
EE36_08223
amtB
Ammonium transporter
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