Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Sulfitobacter sp. EE-36

Properties
Regulator type: Transcription factor
TF locus tag: EE36_15007
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Rhodobacterales
Statistics of regulated genes:
- Genes 24
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 92 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -252
Score: 3.9
Sequence: TGCCAAAAAATGAGGCG
Locus tag: EE36_10385
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: EE36_10390
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: EE36_10395
Name: urtB
Funciton: Urea ABC transporter, permease component 2
Locus tag: EE36_10400
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: EE36_10405
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 1
urtA
Urea ABC transporter, substrate-binding component
urtB
Urea ABC transporter, permease component 1
urtB
Urea ABC transporter, permease component 2
urtD
Urea ABC transporter, ATP-binding component 1
urtE
Urea ABC transporter, ATP-binding component 1

Position: -130
Score: 4.6
Sequence: TGATTAAAATTTGTGCG
Locus tag: EE36_02983
Name: gdhA
Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
gdhA
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)

Position: -158
Score: 3.9
Sequence: TGCACAGATTTTAATCG
Locus tag: EE36_12708
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: EE36_12698
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB
Nitrogen regulatory protein P-II
glnA
Glutamine synthetase type I (EC 6.3.1.2)

Position: -111
Score: 5.3
Sequence: TGCCTAAATTTTAGGCA
Position: -18
Score: 4.5
Sequence: TGCACAAGGATTAAGCG
Locus tag: EE36_14997
Name: nifR3
Funciton: Predicted oxidoreductase, FAD binding
Locus tag: EE36_15002
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: EE36_15007
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: EE36_15012
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: EE36_15017
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
nifR3
Predicted oxidoreductase, FAD binding
ntrB
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
ntrC
Nitrogen regulation protein NR(I), Fis family
ntrY
Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
ntrX
Nitrogen assimilation transcriptional regulator NtrX, Fis family

Position: -93
Score: 5.2
Sequence: TGCTCAAATATTAGGCA
Locus tag: EE36_08503
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: EE36_08498
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: EE36_08488
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: EE36_08483
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: EE36_08478
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: EE36_08473
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: EE36_08468
Name: ureG
Funciton: Urease accessory protein, UreG
ureD
Urease accessory protein, UreD
ureA
Urease, gamma subunit (EC 3.5.1.5)
ureB
Urease, beta subunit (EC 3.5.1.5)
ureC
Urease, alpha subunit (EC 3.5.1.5)
ureE
Urease accessory protein, UreE
ureF
Urease accessory protein, UreF
ureG
Urease accessory protein, UreG

Position: -90
Score: 3.9
Sequence: TGCTCACTGTTTGGGCT
Locus tag: EE36_07968
Name: nasT
Funciton: Nitrogen assimilation attenuator protein NasT
Locus tag: EE36_07973
Name: nrtA2
Funciton: Nitrate ABC transporter, substrate-binding component
nasT
Nitrogen assimilation attenuator protein NasT
nrtA2
Nitrate ABC transporter, substrate-binding component

Position: -164
Score: 5.1
Sequence: CGCCCAATAATTGGGCA
Position: -135
Score: 4.8
Sequence: CGCCCAATAATCAGGCA
Locus tag: EE36_08228
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: EE36_08223
Name: amtB
Funciton: Ammonium transporter
glnK
Nitrogen regulatory protein P-II
amtB
Ammonium transporter
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