Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator NtrC in Rhodobacterales

Properties
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Rhodobacterales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Rhodobacter sphaeroides 2.4.1
RSP_0889 glnK -159 4.5 TGCATTAAAATTGGGCG
RSP_2836 nifR3 -108 4.8 CGCCCAATAAATGTGCA
RSP_2836 nifR3 -18 4.4 CGCACAAGGAATAGGCA
RSP_0146 glnB -126 4.7 TGCACAAAAATCGGGCG
RSP_0310 ureD -124 4.2 TGCCCGATCCTTGAGCG
Paracoccus denitrificans PD1222
Pden_2032 amtB2 -130 4 TGCCCTTATTTCGGGCA
Pden_4131 nifR3 -121 4.3 TGCCGACTATTTAGGCA
Pden_4461 glnB -148 4.4 CGCACATAATTCAGGCA
Pden_4461 glnB -128 4.9 TGCATAATATTCGGGCA
Pden_4455 nasT -140 4 CGCCCGAACCATGGGCA
Jannaschia sp. CCS1
Jann_2236 nifR3 -54 5.1 TGCTTAATTATTGTGCA
Jann_2232 amtB2 -122 4.3 CGCCCGAATAATAGGCG
Jann_4056 glnK -183 4.4 CGCACAAAAAACAGGCA
Jann_1744 ureD -139 4.2 TGCCTGCGAATTAGGCA
Jann_1516 glnB -150 4.4 TGATCATTTTTTAGGCG
Jann_3038 nasT -56 4.6 TGCACAATACTTAATCA
Jann_3440 gdhA -141 4.4 TGCCTGATATTTGCGCA
Jann_3040 nrtA -269 4.7 TGCCCAAAATTCGGGCG
Jann_3041 nrtB -138 4.7 CGCCCAAAAAATAGGCG
Rhodobacterales bacterium HTCC2654
RB2654_10683 glnK -136 4.9 TGACTAAAATTTGTGCA
RB2654_10683 glnK -117 3.9 TGCCCACAATGCGGGCA
RB2654_03209 nifR3 -107 4.6 TGCACAAATAACAGGCA
RB2654_03209 nifR3 -17 4.5 CGCACAAGGATTAAGCA
RB2654_02324 glnB -127 5 TGCATAAATATTGTGCG
RB2654_12499 nasT -91 4.7 TGCCTAGAAATTAGGCA
RB2654_15836 urtA -248 4.5 CGCACAATTATTAGGCT
RB2654_15836 urtA -178 4 TGCTCAAAAGGTATGCA
RB2654_12489 nrtA -260 4.7 CGCACAAGAATTAAGCA
Oceanicola granulosus HTCC2516
OG2516_04471 nifR3 -110 4.4 CGCACAAAAAACAGGCA
OG2516_04471 nifR3 -18 4.7 CGCACAATGTTTGAGCA
OG2516_02329 glnB -148 4.4 TGCCCAATCTTTGTGCC
OG2516_01039 urtA -319 3.9 CGCCCGATAATGGGGCG
OG2516_01044 ureD -66 3.9 CGCCCCATTATCGGGCG
Loktanella vestfoldensis SKA53
SKA53_13946 glnK -144 4.7 TGTACAATAATTGTGCA
SKA53_13946 glnK -173 4.7 TGCCTATTAATCAGGCA
SKA53_04878 nifR3 -109 5 TGACTAATTTTTAGGCA
SKA53_14866 ureD -115 4.9 TGCCTGAATTTTAGGCA
SKA53_05805 glnB -146 4 AGCATGTTATTTGTGCA
SKA53_09869 urtA -280 4.6 AGCATAAAAATTGTGCA
Oceanicola batsensis HTCC2597
OB2597_07075 ureD -204 4.4 CGCCCGTATTTTGGGCA
OB2597_03097 nifR3 -16 4.8 TGCACAAGGTTTAGGCA
OB2597_03097 nifR3 -108 4.6 TGTTCAAAATTTAGGCA
OB2597_10701 glnK -165 4.4 CGCACAAAAATTAATCG
OB2597_10701 glnK -136 5.2 TGCCCAATAATTGTGCA
OB2597_15036 urtA -321 3.9 TGCCTGTTTCTTGGGCT
OB2597_15036 urtA -280 4.2 TGCCCAAAAACTGATCA
Roseovarius nubinhibens ISM
ISM_08965 glnK -175 4.1 CGCCCAATTTCTAGTCA
ISM_16645 nifR3 -18 4.7 TGCACAAGGATTAAGCA
ISM_16645 nifR3 -108 5.1 TGCTTAAATTTTGTGCA
ISM_08965 glnK -146 4.4 TGCACAAAAAATAGTCG
ISM_05410 glnB -161 4.7 TGCCCAAATTTCGGGCG
ISM_05410 glnB -141 5 TGCCTAAATAATGTGCA
Roseovarius sp. 217
ROS217_04115 glnK -133 4.8 TGCACATATTTTGAGCA
ROS217_20467 nifR3 -113 5 CGCCTAAAAATTAGGCG
ROS217_05379 ureD -120 3.9 TGCGCTAAAAATAGGCA
ROS217_20467 nifR3 -21 4.8 TGCACAAGGATTAGGCA
ROS217_04115 glnK -162 4.7 TGCATAAATTTTAGGCT
ROS217_18110 glnB -128 4.8 CGCCCATTATTTAGGCA
ROS217_14776 nasT -111 4.5 CGCCCATTTTATGGGCA
Sulfitobacter sp. EE-36
EE36_08503 ureD -93 5.2 TGCTCAAATATTAGGCA
EE36_14997 nifR3 -111 5.3 TGCCTAAATTTTAGGCA
EE36_14997 nifR3 -18 4.5 TGCACAAGGATTAAGCG
EE36_08228 glnK -164 5.1 CGCCCAATAATTGGGCA
EE36_08228 glnK -135 4.8 CGCCCAATAATCAGGCA
EE36_12708 glnB -158 3.9 TGCACAGATTTTAATCG
EE36_07968 nasT -90 3.9 TGCTCACTGTTTGGGCT
EE36_02983 gdhA -130 4.6 TGATTAAAATTTGTGCG
EE36_10385 urtA -252 3.9 TGCCAAAAAATGAGGCG
Silicibacter TM1040
TM1040_0388 ureD -142 4.3 CGCTTATTTTTTAATCA
TM1040_1363 nifR3 -111 4.6 TGATTAAAAAATAGGCA
TM1040_1363 nifR3 -18 4.7 TGCATAAGGATTAAGCA
TM1040_2629 glnK -159 4.3 CGCCTAAATAACAAGCA
TM1040_1023 glnB -146 4.3 TGCCTATTTTTTAACCA
TM1040_2150 gdhA -112 4.7 TGCCAAAAAATTGTGCA
Silicibacter pomeroyi DSS-3
SPO2089 nifR3 -112 4.7 CGATTAAAAATTAGGCA
SPO2089 nifR3 -20 4.8 TGCACAAGGATTAGGCA
SPO3724 glnK -133 3.9 TGTGCAAAAAATGTGCA
SPO2294 glnB -144 4.8 TGCACAATCCTTGTGCA
SPO2294 glnB -105 3.9 CGCCCAAAATTGCTGCA
Roseobacter sp. MED193
MED193_04621 nifR3 -72 4.7 CGCACAAGGATTAGGCA
MED193_04621 nifR3 -165 5.2 TGCTTAAAATTTAGGCA
MED193_04641 amtB2 -130 4.2 CGCCTATTCTTTAATCA
MED193_15832 glnK -188 4.3 CGCCTAATTTCTGGGCG
MED193_07968 ureD -83 4.2 TGCCCAAAAGTTACGCA
MED193_05036 glnB -145 4.2 CGCCTATTTTTAATGCA
MED193_05036 glnB -125 4.4 TGCCTACTTATTAATCA
MED193_14852 nasT -91 4.6 AGCCTAAAAATTGAGCA
MED193_07963 urtA -201 4.2 TGCGTAACTTTTGGGCA
MED193_14842 nrtA -232 4.5 TGCCCAAAAACTAGGCG
Hyphomonas neptunium ATCC 15444
HNE_2013 nifR3 -10 4.5 TGCCCATGATTTGTGCG
HNE_2083 glnB -145 4.5 CGCCCAATCTTTAATCA
HNE_2083 glnB -124 4.1 TGCACAATCTTTAATCT
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