Regulon of NtrC in Agrobacterium tumefaciens str. C58 (Cereon)

Properties
Regulator type:	Transcription factor
TF locus tag:	Atu1446
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Rhizobiales
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 86 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -297 Score: 4.1 Sequence: AGACCAAATAATAGTCA Position: -278 Score: 4.5 Sequence: TGCACAAAATATAAACA Locus tag: Atu1769 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Atu1770 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Atu1769	glnB	Nitrogen regulatory protein P-II
	Atu1770	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -31 Score: 4 Sequence: TGTCTAAAAATAATGCA Locus tag: Atu1444 Name: nifR3 Funciton: Predicted oxidoreductase, FAD binding Locus tag: Atu1445 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Atu1446 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Atu1444	nifR3	Predicted oxidoreductase, FAD binding
	Atu1445	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Atu1446	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -300 Score: 4.6 Sequence: TGATTAAAATTTAATCG Locus tag: Atu3905 Name: nrtA Funciton: Nitrate ABC transporter, substrate-binding component Locus tag: Atu3904 Name: nrtB Funciton: Nitrate ABC transporter, permease component Locus tag: Atu3903 Name: nrtC Funciton: Nitrate ABC transporter, ATP-binding component Locus tag: Atu3902 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Atu3901 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
	Atu3905	nrtA	Nitrate ABC transporter, substrate-binding component
	Atu3904	nrtB	Nitrate ABC transporter, permease component
	Atu3903	nrtC	Nitrate ABC transporter, ATP-binding component
	Atu3902	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Atu3901	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD