Regulon of NtrC in Sinorhizobium meliloti 1021

Properties
Regulator type:	Transcription factor
TF locus tag:	SMc01043
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Rhizobiales
Statistics of regulated genes:
- Genes	8
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 86 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -306 Score: 4.5 Sequence: TGCACGATAATTGGGCA Position: -276 Score: 3.9 Sequence: GGCCCAATATTTGACCA Locus tag: SMb20436 Name: narK Funciton: Nitrate/nitrite antiporter
	SMb20436	narK	Nitrate/nitrite antiporter
Position: -286 Score: 4.4 Sequence: TGACTAAGAAATGTGCA Position: -254 Score: 4.1 Sequence: TGCTCAAATAACATGCT Locus tag: SMc00947 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: SMc00948 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	SMc00947	glnB	Nitrogen regulatory protein P-II
	SMc00948	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -25 Score: 4 Sequence: TGTCTAAAAATAGTGCA Locus tag: SMc01041 Name: nifR3 Funciton: Predicted oxidoreductase, FAD binding Locus tag: SMc01042 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: SMc01043 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	SMc01041	nifR3	Predicted oxidoreductase, FAD binding
	SMc01042	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	SMc01043	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -214 Score: 4.9 Sequence: TGCTTATATTTTAATCA Locus tag: SMc03806 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: SMc03807 Name: amtB Funciton: Ammonium transporter
	SMc03806	glnK	Nitrogen regulatory protein P-II
	SMc03807	amtB	Ammonium transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD