Regulon of NtrC in Thauera sp. MZ1T

Properties
Regulator type:	Transcription factor
TF locus tag:	Tmz1t_3651
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Various betaproteobacteria
Statistics of regulated genes:
- Genes	12
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 47 sites [see more]

Member of regulog collections

By taxonomy - Various betaproteobacteria
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -23 Score: 5.4 Sequence: CGCACCAGAATAGTGCA Locus tag: Tmz1t_3651 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Tmz1t_3651	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -228 Score: 5.5 Sequence: CGCACCATAGTAGTGCA Position: -196 Score: 5.1 Sequence: CGCACCATTGAAGTGCA Locus tag: Tmz1t_3648 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) Locus tag: Tmz1t_3649 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: Tmz1t_3650 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Tmz1t_3648	glnA	Glutamine synthetase type I (EC 6.3.1.2)
	Tmz1t_3649	ntrZ	Conserved hypothetical signal peptide protein
	Tmz1t_3650	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Position: -115 Score: 4.5 Sequence: CGCACCCCTCTGGTGCG Position: -49 Score: 4.4 Sequence: CGCACTGGAACGGTGCT Locus tag: Tmz1t_0457 Name: amtB2 Funciton: Ammonium transporter
	Tmz1t_0457	amtB2	Ammonium transporter
Position: -290 Score: 4.3 Sequence: CGCACCAGGGCTGTGCA Position: -258 Score: 4.7 Sequence: TGCACCGCAGCAGTGCG Locus tag: Tmz1t_1142 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Tmz1t_1143 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
	Tmz1t_1142	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Tmz1t_1143	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
Position: -175 Score: 5.4 Sequence: CGCACCACATTGGTGCG Locus tag: Tmz1t_0595 Name: CHP02001 Funciton: Conserved hypothetical protein CHP02001 Locus tag: Tmz1t_0594 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: Tmz1t_0593 Name: amtB Funciton: Ammonium transporter
	Tmz1t_0595	CHP02001	Conserved hypothetical protein CHP02001
	Tmz1t_0594	glnK	Nitrogen regulatory protein P-II
	Tmz1t_0593	amtB	Ammonium transporter
Position: -141 Score: 5.7 Sequence: TGCACCAGATTGGTGCA Locus tag: Tmz1t_0842 Name: gltB Funciton: Glutamate synthase, large chain (EC 1.4.1.13) Locus tag: Tmz1t_0843 Name: gltD Funciton: Glutamate synthase, small chain (EC 1.4.1.13)
	Tmz1t_0842	gltB	Glutamate synthase, large chain (EC 1.4.1.13)
	Tmz1t_0843	gltD	Glutamate synthase, small chain (EC 1.4.1.13)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD