Regulon of NtrC in Azoarcus sp. EbN1

Properties
Regulator type:	Transcription factor
TF locus tag:	ebA4116
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Various betaproteobacteria
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 47 sites [see more]

Member of regulog collections

By taxonomy - Various betaproteobacteria
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: 20 Score: 5 Sequence: CGCACCGTTCCGGTGCA Locus tag: ebA3154 Name: CHP02001 Funciton: Conserved hypothetical protein CHP02001 Locus tag: ebB95 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: ebA3151 Name: amtB Funciton: Ammonium transporter
	ebA3154	CHP02001	Conserved hypothetical protein CHP02001
	ebB95	glnK	Nitrogen regulatory protein P-II
	ebA3151	amtB	Ammonium transporter
Position: -23 Score: 5.3 Sequence: CGCACCAAAAAAGTGCA Locus tag: ebA4116 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	ebA4116	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -253 Score: 5.5 Sequence: TGCACCATGATGGTGCG Locus tag: ebA4121 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) Locus tag: ebA4118 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: ebA4117 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	ebA4121	glnA	Glutamine synthetase type I (EC 6.3.1.2)
	ebA4118	ntrZ	Conserved hypothetical signal peptide protein
	ebA4117	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Position: -96 Score: 5.2 Sequence: TGCACAGTTTTGGTGCG Locus tag: ebA2252 Name: gltB Funciton: Glutamate synthase, large chain (EC 1.4.1.13) Locus tag: ebA2251 Name: gltD Funciton: Glutamate synthase, small chain (EC 1.4.1.13)
	ebA2252	gltB	Glutamate synthase, large chain (EC 1.4.1.13)
	ebA2251	gltD	Glutamate synthase, small chain (EC 1.4.1.13)
Position: -159 Score: 5.2 Sequence: CGCACCGTAATTGTGCA Locus tag: ebA4609 Name: amtB2 Funciton: Ammonium transporter
	ebA4609	amtB2	Ammonium transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD