Regulon of NtrC in Acidovorax sp. JS42

Properties
Regulator type:	Transcription factor
TF locus tag:	Ajs_1192
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Comamonadaceae
Statistics of regulated genes:
- Genes	14
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 52 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -155 Score: 5 Sequence: TGCACCAGGCTGGTGCG Locus tag: Ajs_0162 Name: CHP02001 Funciton: Conserved hypothetical protein CHP02001 Locus tag: Ajs_0163 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: Ajs_0164 Name: amtB Funciton: Ammonium transporter
	Ajs_0162	CHP02001	Conserved hypothetical protein CHP02001
	Ajs_0163	glnK	Nitrogen regulatory protein P-II
	Ajs_0164	amtB	Ammonium transporter
Position: -206 Score: 5.7 Sequence: TGCACCAAACGGGTGCA Position: -134 Score: 5.1 Sequence: TGCACGCGTTTGGTGCG Locus tag: Ajs_1189 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) Locus tag: Ajs_1190 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: Ajs_1191 Name: ntrB Funciton: putative nitrogen regulation protein NR(II) Locus tag: Ajs_1192 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Ajs_1189	glnA	Glutamine synthetase type I (EC 6.3.1.2)
	Ajs_1190	ntrZ	Conserved hypothetical signal peptide protein
	Ajs_1191	ntrB	putative nitrogen regulation protein NR(II)
	Ajs_1192	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -120 Score: 4.6 Sequence: GGCACCACTGCGGTGCA Locus tag: Ajs_2842 Name: ybiB Funciton: Conserved hypothetical protein Locus tag: Ajs_2843 Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
	Ajs_2842	ybiB	Conserved hypothetical protein
	Ajs_2843	cysG	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Position: -314 Score: 5 Sequence: TGCACAAATGCGGTGCA Locus tag: Ajs_2831 Name: nrtA Funciton: Nitrate ABC transporter, substrate-binding component Locus tag: Ajs_2832 Name: nrtB Funciton: Nitrate ABC transporter, permease component Locus tag: Ajs_2833 Name: nrtC Funciton: Nitrate ABC transporter, ATP-binding component
	Ajs_2831	nrtA	Nitrate ABC transporter, substrate-binding component
	Ajs_2832	nrtB	Nitrate ABC transporter, permease component
	Ajs_2833	nrtC	Nitrate ABC transporter, ATP-binding component
Position: -328 Score: 4.5 Sequence: TGCACCACGGCGGTGCG Locus tag: Ajs_2839 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Ajs_2840 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
	Ajs_2839	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Ajs_2840	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD