Regulon of NtrC in Acidovorax avenae subsp. citrulli AAC00-1

Properties
Regulator type:	Transcription factor
TF locus tag:	Aave_1445
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Comamonadaceae
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 52 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -207 Score: 5.6 Sequence: TGCACGATTTTGGTGCG Position: -184 Score: 4.9 Sequence: GGCCCCGAATTGGTGCG Locus tag: Aave_1442 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) Locus tag: Aave_1443 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: Aave_1444 Name: ntrB Funciton: putative nitrogen regulation protein NR(II) Locus tag: Aave_1445 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Aave_1442	glnA	Glutamine synthetase type I (EC 6.3.1.2)
	Aave_1443	ntrZ	Conserved hypothetical signal peptide protein
	Aave_1444	ntrB	putative nitrogen regulation protein NR(II)
	Aave_1445	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -180 Score: 5.1 Sequence: CGCACCATTCGGGTGCG Position: -108 Score: 4.6 Sequence: CGCACCCATTCGGAGCG Locus tag: Aave_0232 Name: CHP02001 Funciton: Conserved hypothetical protein CHP02001 Locus tag: Aave_0233 Name: glnK Funciton: Nitrogen regulatory protein P-II
	Aave_0232	CHP02001	Conserved hypothetical protein CHP02001
	Aave_0233	glnK	Nitrogen regulatory protein P-II
Position: -331 Score: 4.4 Sequence: TGCACCGAAGCGGTTCA Locus tag: Aave_2107 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Aave_2106 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
	Aave_2107	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Aave_2106	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
Position: -282 Score: 4.8 Sequence: CGCACGAAGAGGGTGCA Locus tag: Aave_2147 Name: nrtA Funciton: Nitrate ABC transporter, substrate-binding component Locus tag: Aave_2146 Name: nrtB Funciton: Nitrate ABC transporter, permease component Locus tag: Aave_2145 Name: nrtC Funciton: Nitrate ABC transporter, ATP-binding component
	Aave_2147	nrtA	Nitrate ABC transporter, substrate-binding component
	Aave_2146	nrtB	Nitrate ABC transporter, permease component
	Aave_2145	nrtC	Nitrate ABC transporter, ATP-binding component

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD