Regulon of NtrC in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type:	Transcription factor
TF locus tag:	PSPTO0352
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Pseudomonadaceae
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 49 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -348 Score: 4.6 Sequence: TGCACGCTTATGGCGCG Position: -315 Score: 4.9 Sequence: AGCACCATTGTTGTGCA Locus tag: PSPTO0217 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: PSPTO0218 Name: amtB Funciton: Ammonium transporter
	PSPTO0217	glnK	Nitrogen regulatory protein P-II
	PSPTO0218	amtB	Ammonium transporter
Position: -47 Score: 4.8 Sequence: TGCACCGGTATAGTGCG Locus tag: PSPTO5500 Name: alsT Funciton: Predicted alanin/sodium symporter Locus tag: PSPTO5501 Name: ansA Funciton: L-asparaginase I (EC 3.5.1.1)
	PSPTO5500	alsT	Predicted alanin/sodium symporter
	PSPTO5501	ansA	L-asparaginase I (EC 3.5.1.1)
Position: -119 Score: 5 Sequence: TGCACAGGAATGGTGCG Locus tag: PSPTO2059 Name: ybdK Funciton: Carboxylate-amine ligase Locus tag: PSPTO2060 Name: PF04168 Funciton: Conserved hypothetical protein Locus tag: PSPTO2061 Name: PF01841 Funciton: Transglutaminase-like protein
	PSPTO2059	ybdK	Carboxylate-amine ligase
	PSPTO2060	PF04168	Conserved hypothetical protein
	PSPTO2061	PF01841	Transglutaminase-like protein
Position: -208 Score: 4.9 Sequence: AGCGCCATAACGGTGCG Locus tag: PSPTO0359 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	PSPTO0359	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -267 Score: 5.3 Sequence: AGCACCTTTTTGGTGCA Position: -50 Score: 4.2 Sequence: AGCACCAGCATTGCGCG Locus tag: PSPTO0353 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: PSPTO0352 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	PSPTO0353	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	PSPTO0352	ntrC	Nitrogen regulation protein NR(I), Fis family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD