Regulon of NtrC in Colwellia psychrerythraea 34H

Properties
Regulator type:	Transcription factor
TF locus tag:	CPS_0397
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -139 Score: 4.4 Sequence: TGCACGCTCTTGGTGCG Locus tag: CPS_0641 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: CPS_0642 Name: amtB Funciton: Ammonium transporter
	CPS_0641	glnK	Nitrogen regulatory protein P-II
	CPS_0642	amtB	Ammonium transporter
Position: -42 Score: 5.5 Sequence: CGCACCAAAACGGTGCA Locus tag: CPS_0398 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: CPS_0397 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	CPS_0398	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	CPS_0397	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -203 Score: 5.1 Sequence: AGCACCACTAAGGTGCA Locus tag: CPS_0400 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	CPS_0400	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD