Regulon of NtrC in Glaciecola sp. HTCC2999

Properties
Regulator type:	Transcription factor
TF locus tag:	GHTCC_010100001120
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -28 Score: 5.7 Sequence: CGCACCTTTTTGGTGCA Locus tag: GHTCC_010100001115 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: GHTCC_010100001120 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	GHTCC_010100001115	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	GHTCC_010100001120	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -170 Score: 5.1 Sequence: TGCACTTATTAAGTGCA Locus tag: GHTCC_010100001884 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: GHTCC_010100001889 Name: amtB Funciton: Ammonium transporter
	GHTCC_010100001884	glnK	Nitrogen regulatory protein P-II
	GHTCC_010100001889	amtB	Ammonium transporter
Position: -196 Score: 5.6 Sequence: TGCACCTATTTGGTGCT Locus tag: GHTCC_010100001110 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	GHTCC_010100001110	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD