Regulon of NtrC in Alteromonas macleodii 'Deep ecotype'

Properties
Regulator type:	Transcription factor
TF locus tag:	MADE_01588
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -33 Score: 5.6 Sequence: TGCACAATAATGGTGCA Locus tag: MADE_01589 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: MADE_01588 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	MADE_01589	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	MADE_01588	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -162 Score: 5.3 Sequence: TGCACCATTGTTGTGCA Locus tag: MADE_00479 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: MADE_00480 Name: amtB Funciton: Ammonium transporter
	MADE_00479	glnK	Nitrogen regulatory protein P-II
	MADE_00480	amtB	Ammonium transporter
Position: -162 Score: 5.5 Sequence: TGCACATTTTTGGTGCA Locus tag: MADE_01591 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	MADE_01591	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD