Regulon of NtrC in Pseudoalteromonas atlantica T6c

Properties
Regulator type:	Transcription factor
TF locus tag:	Patl_1028
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -35 Score: 5.6 Sequence: AGCACCAAAATGGTGCG Locus tag: Patl_1027 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Patl_1028 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Patl_1027	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Patl_1028	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -191 Score: 4.3 Sequence: TGCATGGTAATGGTGCG Locus tag: Patl_1025 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Patl_1025	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -178 Score: 4.9 Sequence: TGCGCTAATTCGGTGCA Locus tag: Patl_0491 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: Patl_0492 Name: amtB Funciton: Ammonium transporter
	Patl_0491	glnK	Nitrogen regulatory protein P-II
	Patl_0492	amtB	Ammonium transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD