Regulon of NtrC in Vibrio angustum S14
| Regulator type: | Transcription factor |
| TF locus tag: | VAS14_22974 |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Regulog: | NtrC - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - NtrC
- By TF family - Fis
- By effector - Phosphorylated NtrB, signal histidine kinase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -70
Score: 5.8 Sequence: TGCACCAATTTGGTGCG
Locus tag: VAS14_22979
Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VAS14_22974
Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family |
|||
|
ntrB
|
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
|
||
|
ntrC
|
Nitrogen regulation protein NR(I), Fis family
|
||
|
Position: -142
Score: 5.4 Sequence: TGCACTGTGATGGTGCA
Locus tag: VAS14_20021
Name: glnK Funciton: Nitrogen regulatory protein P-II
Locus tag: VAS14_20026
Name: amtB Funciton: Ammonium transporter |
|||
|
glnK
|
Nitrogen regulatory protein P-II
|
||
|
amtB
|
Ammonium transporter
|
||
|
Position: -202
Score: 5.1 Sequence: TGCACCAAAGCAGTGCA
Locus tag: VAS14_22994
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
|||
|
glnA
|
Glutamine synthetase type I (EC 6.3.1.2)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |