Regulon of NtrC in Vibrio shilonii AK1

Properties
Regulator type:	Transcription factor
TF locus tag:	VSAK1_12502
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Vibrionales
Statistics of regulated genes:
- Genes	4
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 29 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -238 Score: 5.2 Sequence: TTCACTATATTGGTGCG Locus tag: VSAK1_11520 Name: amtB2 Funciton: Ammonium transporter
	VSAK1_11520	amtB2	Ammonium transporter
Position: -123 Score: 5.8 Sequence: TGCACCATTTTAGTGCA Locus tag: VSAK1_12507 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: VSAK1_12502 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	VSAK1_12507	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	VSAK1_12502	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -225 Score: 5.4 Sequence: TGCACCATAAAAGTGCA Locus tag: VSAK1_12517 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	VSAK1_12517	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD