Regulon of NtrC in Vibrio parahaemolyticus RIMD 2210633

Properties
Regulator type:	Transcription factor
TF locus tag:	VP0118
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Vibrionales
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 29 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -182 Score: 5.3 Sequence: CGCATTATATTGGTGCA Locus tag: VP1523 Name: amtB2 Funciton: Ammonium transporter
	VP1523	amtB2	Ammonium transporter
Position: -49 Score: 5.6 Sequence: TGCACCATTATTGTGCA Locus tag: VP0119 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: VP0118 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	VP0119	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	VP0118	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -137 Score: 5.5 Sequence: CGCACCATATCGGTGCG Locus tag: VP2493 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: VP2492 Name: amtB Funciton: Ammonium transporter
	VP2493	glnK	Nitrogen regulatory protein P-II
	VP2492	amtB	Ammonium transporter
Position: -229 Score: 5.3 Sequence: CGCACCACTTTAGTGCA Locus tag: VP0121 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	VP0121	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD