Regulon of IscR in Pseudomonas stutzeri A1501
| Regulator type: | Transcription factor |
| TF locus tag: | PST_3043 |
| Regulator family: | Rrf2 |
| Regulation mode: | activator (repressor) |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Regulog: | IscR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By trascription factor - IscR
- By TF family - Rrf2
- By effector - Iron-sulfur cluster redox state
- By pathway - Iron-sulfur cluster biogenesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -4
Score: 6.9 Sequence: ATAGTTGACTCAAATACTCGGGAAT
Locus tag: PST_3043
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: PST_3042
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: PST_3041
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: PST_3040
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: PST_3039
Name: hscB Funciton: Chaperone protein HscB
Locus tag: PST_3038
Name: hscA Funciton: Chaperone protein HscA
Locus tag: PST_3037
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: PST_3036
Name: yfhJ Funciton: putative Fe-S cluster assembly protein |
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iscR
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Iron-sulfur cluster regulator IscR
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iscS
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Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
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iscU
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Iron-sulfur cluster assembly scaffold protein IscU
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iscA
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Iron binding protein IscA for iron-sulfur cluster assembly
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hscB
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Chaperone protein HscB
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hscA
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Chaperone protein HscA
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fdx
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ferredoxin, 2Fe-2S type, ISC system
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yfhJ
|
putative Fe-S cluster assembly protein
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Position: -76
Score: 6.5 Sequence: ATAGTTGACCGGTTTTGTCAGGCAA
Locus tag: PST_0755
Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family |
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erpA
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ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |