Profile of regulator IscR in Pseudomonadaceae
Properties
| Regulator family: |
Rrf2 |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Iron-sulfur cluster biogenesis |
| Effector: |
Iron-sulfur cluster redox state |
| Regulog: |
IscR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA0665 |
erpA |
-81 |
6.4 |
TTAGTTGACCATTTTTCTGGGACAA |
|
PA3815 |
iscR |
-71 |
7.1 |
ATAGTTGACCTAATTACTCGGATAA |
|
Pseudomonas entomophila L48
|
|
PSEEN0461 |
erpA |
-79 |
6.7 |
ATTCTTGACCGATTTTCTCGGAGAA |
|
PSEEN1009 |
iscR |
-70 |
7 |
ATAGTTGACTTAAATGCTCGGGAAT |
|
Pseudomonas putida KT2440
|
|
PP0433 |
erpA |
-32 |
6.9 |
ATTCTTGACCGATTTTCTCGGGAAA |
|
PP0841 |
iscR |
-70 |
7 |
ATAGTTGACTTAAATGCTCGGGAAT |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO1422 |
iscR |
-65 |
7.1 |
ATAGTTGACTAATTTGCTCGGGAAT |
|
PSPTO0605 |
erpA |
-93 |
6.9 |
ATAGTTGACCGATTTTCTAGGAGAA |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_4966 |
iscR |
-66 |
7 |
ATAGTTGACCTGATTACTCGGGTAT |
|
PFL_5610 |
erpA |
-81 |
6.7 |
ATAGTTGACCGCTTTTCTGGGAGAA |
|
Pseudomonas mendocina ymp
|
|
Pmen_3930 |
erpA |
-77 |
7.3 |
ATAGTTGACCAATTTTCTCGGGCAA |
|
Pmen_3512 |
iscR |
-64 |
7 |
ATAGTTGACTTAAATACTCGGGAAT |
|
Pseudomonas stutzeri A1501
|
|
PST_3043 |
iscR |
-4 |
6.9 |
ATAGTTGACTCAAATACTCGGGAAT |
|
PST_0755 |
erpA |
-76 |
6.5 |
ATAGTTGACCGGTTTTGTCAGGCAA |
|
Azotobacter vinelandii AvOP
|
|
Avin_40410 |
iscR |
-65 |
6.1 |
ATAGTTGATCCTGTTTGTCGGGTAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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