Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of IscR in Pseudomonas mendocina ymp

Properties
Regulator type: Transcription factor
TF locus tag: Pmen_3512
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Regulog: IscR - Pseudomonadaceae
Statistics of regulated genes:
- Genes 9
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -77
Score: 7.3
Sequence: ATAGTTGACCAATTTTCTCGGGCAA
Locus tag: Pmen_3930
Name: erpA
Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
erpA
ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family

Position: -64
Score: 7
Sequence: ATAGTTGACTTAAATACTCGGGAAT
Locus tag: Pmen_3512
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Pmen_3511
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Pmen_3510
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Pmen_3509
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Pmen_3508
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Pmen_3507
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Pmen_3506
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: Pmen_3505
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR
Iron-sulfur cluster regulator IscR
iscS
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
iscU
Iron-sulfur cluster assembly scaffold protein IscU
iscA
Iron binding protein IscA for iron-sulfur cluster assembly
hscB
Chaperone protein HscB
hscA
Chaperone protein HscA
fdx
ferredoxin, 2Fe-2S type, ISC system
yfhJ
putative Fe-S cluster assembly protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD