Regulon of IscR in Vibrio salmonicida LFI1238

Properties
Regulator type:	Transcription factor
TF locus tag:	VSAL_I0716
Regulator family:	Rrf2
Regulation mode:	activator (repressor)
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Regulog:	IscR - Vibrionales
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - IscR
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Regulated operons
	Locus Tag	Name	Function
Position: -30 Score: 4.9 Sequence: TAATCATACTAATTTAGTCAGGTAT Locus tag: VSAL_I2911 Name: nfuA Funciton: NfuA Fe-S protein maturation
	VSAL_I2911	nfuA	NfuA Fe-S protein maturation
Position: -94 Score: 6.7 Sequence: ATACTTGACTAAAATAGTAGGATAA Position: -69 Score: 7.2 Sequence: ATACTTGACCAAAATGGTCAGGTAT Locus tag: VSAL_I0716 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: VSAL_I0717 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Locus tag: VSAL_I0718 Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU Locus tag: VSAL_I0719 Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly Locus tag: VSAL_I0720 Name: hscB Funciton: Chaperone protein HscB Locus tag: VSAL_I0721 Name: hscA Funciton: Chaperone protein HscA Locus tag: VSAL_I0722 Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system Locus tag: VSAL_I0723 Name: yfhJ Funciton: putative Fe-S cluster assembly protein
	VSAL_I0716	iscR	Iron-sulfur cluster regulator IscR
	VSAL_I0717	iscS	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
	VSAL_I0718	iscU	Iron-sulfur cluster assembly scaffold protein IscU
	VSAL_I0719	iscA	Iron binding protein IscA for iron-sulfur cluster assembly
	VSAL_I0720	hscB	Chaperone protein HscB
	VSAL_I0721	hscA	Chaperone protein HscA
	VSAL_I0722	fdx	ferredoxin, 2Fe-2S type, ISC system
	VSAL_I0723	yfhJ	putative Fe-S cluster assembly protein
Position: -75 Score: 7 Sequence: ATACTTGAATGAAACAGTCAGGTAT Locus tag: VSAL_I2571 Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
	VSAL_I2571	erpA	ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD