Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of IscR in Vibrio fischeri ES114

Properties
Regulator type: Transcription factor
TF locus tag: VF_0616
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Regulog: IscR - Vibrionales
Statistics of regulated genes:
- Genes 10
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 39 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -30
Score: 4.9
Sequence: TAATCATACTAAATTAGTCAGGTAT
Locus tag: VF_2461
Name: nfuA
Funciton: NfuA Fe-S protein maturation
nfuA
NfuA Fe-S protein maturation

Position: -94
Score: 6.3
Sequence: GTACTTGACTAAAATAGTAGGATAA
Position: -69
Score: 7.4
Sequence: ATACTTGACCAAAATAGTCAGGTAT
Locus tag: VF_0616
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: VF_0617
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: VF_0618
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: VF_0619
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: VF_0620
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: VF_0621
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: VF_0622
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: VF_0623
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR
Iron-sulfur cluster regulator IscR
iscS
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
iscU
Iron-sulfur cluster assembly scaffold protein IscU
iscA
Iron binding protein IscA for iron-sulfur cluster assembly
hscB
Chaperone protein HscB
hscA
Chaperone protein HscA
fdx
ferredoxin, 2Fe-2S type, ISC system
yfhJ
putative Fe-S cluster assembly protein

Position: -75
Score: 7
Sequence: ATACTTGAATGAAACAGTCAGGTAT
Locus tag: VF_2134
Name: erpA
Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
erpA
ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD