Regulon of IscR in Vibrio harveyi ATCC BAA-1116

Properties
Regulator type:	Transcription factor
TF locus tag:	VIBHAR_01054
Regulator family:	Rrf2
Regulation mode:	activator (repressor)
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Regulog:	IscR - Vibrionales
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 39 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - IscR
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Regulated operons
	Locus Tag	Name	Function
Position: -30 Score: 5.1 Sequence: ATAGCCTACAAATTTACTCAGGTAT Locus tag: VIBHAR_00614 Name: nfuA Funciton: NfuA Fe-S protein maturation
	VIBHAR_00614	nfuA	NfuA Fe-S protein maturation
Position: -93 Score: 6.9 Sequence: ATACCTGACTAAAATAGTCAAATAA Position: -68 Score: 6.7 Sequence: ATACTTGACCGTTTTGGTCGGGTAT Locus tag: VIBHAR_01054 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: VIBHAR_01055 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Locus tag: VIBHAR_01056 Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU Locus tag: VIBHAR_01057 Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly Locus tag: VIBHAR_01058 Name: hscB Funciton: Chaperone protein HscB Locus tag: VIBHAR_01059 Name: hscA Funciton: Chaperone protein HscA Locus tag: VIBHAR_01060 Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system Locus tag: VIBHAR_01061 Name: yfhJ Funciton: putative Fe-S cluster assembly protein
	VIBHAR_01054	iscR	Iron-sulfur cluster regulator IscR
	VIBHAR_01055	iscS	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
	VIBHAR_01056	iscU	Iron-sulfur cluster assembly scaffold protein IscU
	VIBHAR_01057	iscA	Iron binding protein IscA for iron-sulfur cluster assembly
	VIBHAR_01058	hscB	Chaperone protein HscB
	VIBHAR_01059	hscA	Chaperone protein HscA
	VIBHAR_01060	fdx	ferredoxin, 2Fe-2S type, ISC system
	VIBHAR_01061	yfhJ	putative Fe-S cluster assembly protein
Position: -87 Score: 6.7 Sequence: ATACTTGAACGAGTTTGTCAGGTAT Locus tag: VIBHAR_03416 Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
	VIBHAR_03416	erpA	ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD