Regulon of HypR in Colwellia psychrerythraea 34H

Properties
Regulator type:	Transcription factor
TF locus tag:	CPS_4142
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	Proline; 4-hydroxyproline
Regulog:	HypR - Alteromonadales
Statistics of regulated genes:
- Genes	6
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 21 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - HypR
By TF family - GntR/Others
By effector - Proline
By effector - 4-hydroxyproline
By pathway - Proline and 4-hydrohyproline utilization

Regulated operons
	Locus Tag	Name	Function
Position: -49 Score: 5 Sequence: ATTGTATGCAAT Position: -32 Score: 4.3 Sequence: ATTTTATTCAAT Locus tag: CPS_2237 Name: colA2 Funciton: Microbial collagenase, secreted (EC 3.4.24.3)
	CPS_2237	colA2	Microbial collagenase, secreted (EC 3.4.24.3)
Position: 6 Score: 4 Sequence: ATAGTATATAAA Locus tag: CPS_4142 Name: hypR Funciton: Predicted regulator for proline and hydrohyproline utilization, GntR family
	CPS_4142	hypR	Predicted regulator for proline and hydrohyproline utilization, GntR family
Position: -162 Score: 4.2 Sequence: ATAATATACAAT Locus tag: CPS_4791 Name: omp, COG1629 (CirA) Funciton: TonB-dependent receptor, collagen-binding surface protein
	CPS_4791	omp, COG1629 (CirA)	TonB-dependent receptor, collagen-binding surface protein
Position: -100 Score: 5.3 Sequence: ATTGTATACAAT Locus tag: CPS_1449 Name: hypD Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted Locus tag: CPS_1450 Name: hypE Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
	CPS_1449	hypD	1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
	CPS_1450	hypE	Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
Position: -115 Score: 4.7 Sequence: AGTGTATACAAT Locus tag: CPS_1459 Name: prdP Funciton: Proline dipeptidase
	CPS_1459	prdP	Proline dipeptidase

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