Regulon of PrpR in Photobacterium profundum SS9
| Regulator type: | Transcription factor |
| TF locus tag: | PBPRB0234 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Methylcitrate utilization |
| Effector: | 2-methylcitrate |
| Regulog: | PrpR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - PrpR
- By TF family - GntR/Others
- By effector - 2-methylcitrate
- By pathway - Methylcitrate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -202
Score: 4.8 Sequence: ATTGTCTACAGT
Position: -130
Score: 5.1 Sequence: ACTGTCGACAAT
Position: -97
Score: 4.9 Sequence: ATTGTTAACAAT
Position: -34
Score: 5.4 Sequence: ATTGTTGACAAT
Locus tag: PBPRB0234
Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: PBPRB0235
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: PBPRB0236
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: PBPRB0237
Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
Locus tag: PBPRB0238
Name: prpE Funciton: Propionyl-CoA synthetase (EC 6.2.1.17) |
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prpR
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Propionate catabolism operon transcriptional regulator of GntR family
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prpB
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Methylisocitrate lyase (EC 4.1.3.30)
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prpC
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2-methylcitrate synthase (EC 2.3.3.5)
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prpD
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2-methylcitrate dehydratase (EC 4.2.1.79)
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prpE
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Propionyl-CoA synthetase (EC 6.2.1.17)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |