Regulon of FadR in Photobacterium profundum SS9

Properties
Regulator type:	Transcription factor
TF locus tag:	PBPRA2608
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Vibrionales
Statistics of regulated genes:
- Genes	8
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 77 sites [see more]

Member of regulog collections

By trascription factor - FadR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -74 Score: 3.3 Sequence: CACTGATCCGAGTTGTT Locus tag: PBPRA1773 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	PBPRA1773	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -91 Score: 4.9 Sequence: TTGTGGTCTGACCTCTA Locus tag: PBPRA0961 Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: PBPRA0962 Name: fadJ Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	PBPRA0961	fadI	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	PBPRA0962	fadJ	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -101 Score: 5 Sequence: AACTGGTCAGATTTGAT Locus tag: PBPRA0958 Name: fadL Funciton: Long-chain fatty acid transport protein
	PBPRA0958	fadL	Long-chain fatty acid transport protein
Position: -36 Score: 5.2 Sequence: TACTGGTCAGACCATAA Locus tag: PBPRA2594 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	PBPRA2594	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -127 Score: 5.3 Sequence: AAGTGGTAAGACCTCTT Locus tag: PBPRA2915 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	PBPRA2915	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -59 Score: 5.5 Sequence: AACAGGTCAAACCAGTT Locus tag: PBPRA0064 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: PBPRA0063 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	PBPRA0064	fadB	Enoyl-CoA hydratase (EC 4.2.1.17)
	PBPRA0063	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD