Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadR in Photobacterium profundum SS9

Properties
Regulator type: Transcription factor
TF locus tag: PBPRA2608
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Vibrionales
Statistics of regulated genes:
- Genes 8
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 77 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -74
Score: 3.3
Sequence: CACTGATCCGAGTTGTT
Locus tag: PBPRA1773
Name: fabA
Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
fabA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)

Position: -91
Score: 4.9
Sequence: TTGTGGTCTGACCTCTA
Locus tag: PBPRA0961
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: PBPRA0962
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
fadI
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadJ
Enoyl-CoA hydratase (EC 4.2.1.17)

Position: -101
Score: 5
Sequence: AACTGGTCAGATTTGAT
Locus tag: PBPRA0958
Name: fadL
Funciton: Long-chain fatty acid transport protein
fadL
Long-chain fatty acid transport protein

Position: -36
Score: 5.2
Sequence: TACTGGTCAGACCATAA
Locus tag: PBPRA2594
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
fadH
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)

Position: -127
Score: 5.3
Sequence: AAGTGGTAAGACCTCTT
Locus tag: PBPRA2915
Name: fadE2
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
fadE2
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Position: -59
Score: 5.5
Sequence: AACAGGTCAAACCAGTT
Locus tag: PBPRA0064
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: PBPRA0063
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadB
Enoyl-CoA hydratase (EC 4.2.1.17)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD