Profile of regulator FadR in Vibrionales
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
repressor (activator) |
| Biological process: |
Fatty acid degradation |
| Effector: |
Palmitoyl-CoA; Oleoyl-CoA |
| Regulog: |
FadR - Vibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Vibrio cholerae O1 biovar eltor str. N16961
|
|
VC1043 |
fadL |
-125 |
3.4 |
CAATGGTCGGATTTCTA |
|
VC1483 |
fabA |
-70 |
3.3 |
CACTGATCGGAGTTGTT |
|
VC2758 |
fadB |
-76 |
5.4 |
AACTGGTCAAACCAGAA |
|
VC0093 |
plsB |
-131 |
4.6 |
AAAAGGTTTGACCAGTT |
|
VC2231 |
fadE2 |
-82 |
5.7 |
AACTGGTTAGACCACTA |
|
VC2105 |
VC2105 |
-109 |
4 |
AAGTGCTCTTACCAGTT |
|
VC1993 |
fadH |
-42 |
5.2 |
TTCTGGTCAGACCATAT |
|
Vibrio vulnificus CMCP6
|
|
VV1_2629 |
fabA |
-86 |
4.2 |
AACTGGTTTGTCTAGTA |
|
VV1_2629 |
fabA |
-71 |
3.4 |
TACTGATCGGAGTTGTT |
|
VV1_0981 |
fadB |
-109 |
5.1 |
AACTGGTCTAACCAGAA |
|
VV1_1165 |
plsB |
-131 |
4.6 |
AAAAGGTTTGACCAGTT |
|
VV1_1896 |
fadE2 |
-138 |
3.8 |
CTCTACTCAGATCACTT |
|
VV1_1896 |
fadE2 |
-68 |
5.5 |
AACTGGTTTGACCTCTT |
|
VV1_3132 |
fadH |
-38 |
4.5 |
CTCTGGTCTGACCACGA |
|
VV1_1972 |
fadL |
-108 |
3.3 |
CAATGGTCGGATTTGTA |
|
VV1_1975 |
fadI |
-34 |
5.7 |
ATCAGGTCAGACCTCTT |
|
Vibrio harveyi ATCC BAA-1116
|
|
VIBHAR_02332 |
fabA |
-85 |
4.2 |
AACTGGTTTGTCTAGTA |
|
VIBHAR_02332 |
fabA |
-70 |
3.4 |
TACTGATCGGAGTTGTT |
|
VIBHAR_00460 |
fadB |
-126 |
5.1 |
CACTGGTCAAACCAGAA |
|
VIBHAR_00269 |
plsB |
-213 |
4.6 |
AAAAGGTTTGACCAGTT |
|
VIBHAR_03204 |
fadE2 |
-67 |
5.6 |
TACTGGTTAGACCTCTT |
|
VIBHAR_01340 |
VC2105 |
-57 |
4.8 |
TACAGATCAGACCAGTT |
|
VIBHAR_03043 |
fadH |
-39 |
5 |
CTGTGGTCAGACCACAA |
|
VIBHAR_03124 |
fadL |
-103 |
3.3 |
CAATGGTCGGATTTGTA |
|
VIBHAR_03121 |
fadI |
-34 |
5.7 |
ATCAGGTCAGACCTCTT |
|
Vibrio parahaemolyticus RIMD 2210633
|
|
VP1591 |
fabA |
-85 |
4.2 |
AACTGGTTTGTCTAGTA |
|
VP1591 |
fabA |
-70 |
3.4 |
TACTGATCGGAGTTGTT |
|
VP0030 |
fadB |
-115 |
5.2 |
TACTGGTCAAACCAGAA |
|
VP2947 |
plsB |
-158 |
4.6 |
AAAAGGTTTGACCAGTT |
|
VP2289 |
fadE2 |
-67 |
5.9 |
AACTGGTTAGACCTCTT |
|
VP0834 |
VC2105 |
-57 |
4.5 |
TACAGATCTGACCAGTT |
|
VP2151 |
fadH |
-48 |
4.3 |
GTCTGGTCAGACCATGA |
|
VP2209 |
fadI |
-34 |
5.7 |
ATCAGGTCAGACCTCTT |
|
Vibrio shilonii AK1
|
|
VSAK1_12702 |
fadB |
-76 |
5.1 |
AACTGGTCTAACCAGAA |
|
VSAK1_12467 |
plsB |
-132 |
4.7 |
AAAAGGTAAGACCAGTT |
|
VSAK1_07334 |
fadE2 |
-83 |
4.8 |
TACTGGTACGACCTCTT |
|
VSAK1_10623 |
VC2105 |
-52 |
4.7 |
AACACGTCTGACCAGTT |
|
VSAK1_03494 |
fadH |
-43 |
5.4 |
TTCTGGTCAGACCACAA |
|
VSAK1_03229 |
fadL |
-115 |
4.8 |
TACTGGTCAGATTTCTA |
|
VSAK1_03244 |
fadI |
-31 |
5.2 |
CTGTGGTCAGACCTCTT |
|
Vibrio splendidus LGP32
|
|
VS_1429 |
fabA |
-79 |
4.2 |
AACTGGTTTGTCTAGTA |
|
VS_1429 |
fabA |
-64 |
4 |
TACTGATCGGACTTGTT |
|
VS_0041 |
fadB |
-87 |
4.4 |
AACTGGTCTTACCAGGT |
|
VS_3009 |
plsB |
-148 |
4.9 |
AAAAGGTTAGACCAGTT |
|
VS_2322 |
fadE2 |
-63 |
5.3 |
GACTGGTTAGACCTCTT |
|
VS_0938 |
fadH |
-33 |
4.8 |
TTGTGGTCTGACCACAA |
|
VS_0861 |
fadL |
-107 |
3.3 |
CAATGGTCGGATTTGTA |
|
VS_0864 |
fadI |
-34 |
5.5 |
TTCAGGTCAGACCTCTT |
|
Vibrio fischeri ES114
|
|
VF_1812 |
fadL |
-128 |
3.2 |
CAGTGGTCGGATTTGTC |
|
VF_0025 |
fadB |
-68 |
5.6 |
AACTGGTCAAACCAGAT |
|
VF_2443 |
plsB |
-95 |
4.6 |
AAAAGGTTTGACCAGTT |
|
VF_1932 |
fadE2 |
-97 |
5.9 |
AACTGGTTAGACCTCTT |
|
VF_0811 |
VC2105 |
-32 |
4.7 |
ATGAGGTCTGACCAGAA |
|
VF_1642 |
fadH |
-39 |
5.4 |
TTCTGGTCAGACCACAA |
|
VF_1811 |
fadI |
-39 |
4.3 |
TTGAGGTCTGACCACCT |
|
Vibrio salmonicida LFI1238
|
|
VSAL_I1556 |
fabA |
-71 |
4.2 |
AGCTGATCAGACTTGAT |
|
VSAL_I1556 |
fabA |
-86 |
4.6 |
AACTGGTTTAACCAGAG |
|
VSAL_I2974 |
fadB |
-68 |
4.6 |
AACTGGTCAAACCAGGC |
|
VSAL_I2894 |
plsB |
-95 |
4.6 |
AAAAGGTTTGACCAGTT |
|
VSAL_I2395 |
fadE2 |
-114 |
5.3 |
AACTAGTTAGACCTCTT |
|
VSAL_I0834 |
VC2105 |
-33 |
4.7 |
ATGAGGTCTGACCAGAA |
|
VSAL_I2156 |
fadH |
-39 |
5.1 |
TTCTGGTCTGACCACAA |
|
VSAL_I2269 |
fadL |
-128 |
3.3 |
TAGTGGTCGGATTTGTC |
|
VSAL_I2268 |
fadI |
-43 |
4.6 |
TTGAGGTCTGACCACTA |
|
Vibrio angustum S14
|
|
VAS14_02868 |
fabA |
-74 |
3.6 |
AACTGATCCGAGTTGTT |
|
VAS14_02868 |
fabA |
-89 |
4.6 |
AACTGGTTTGTCCAGAA |
|
VAS14_22297 |
fadB |
-63 |
5.5 |
AACAGGTCAAACCAGTT |
|
VAS14_00423 |
fadE2 |
-155 |
5.3 |
AAGTGGTAAGACCTCTT |
|
VAS14_05978 |
fadH |
-37 |
5.2 |
TACTGGTCAGACCATAA |
|
VAS14_17316 |
fadL |
-107 |
4.6 |
CACTGGTCAGATTTGAT |
|
VAS14_17336 |
fadI |
-71 |
4.3 |
GTGAGGTCTGACCTCTA |
|
Photobacterium profundum SS9
|
|
PBPRA1773 |
fabA |
-74 |
3.3 |
CACTGATCCGAGTTGTT |
|
PBPRA0064 |
fadB |
-59 |
5.5 |
AACAGGTCAAACCAGTT |
|
PBPRA2915 |
fadE2 |
-127 |
5.3 |
AAGTGGTAAGACCTCTT |
|
PBPRA2594 |
fadH |
-36 |
5.2 |
TACTGGTCAGACCATAA |
|
PBPRA0958 |
fadL |
-101 |
5 |
AACTGGTCAGATTTGAT |
|
PBPRA0961 |
fadI |
-91 |
4.9 |
TTGTGGTCTGACCTCTA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
