Regulon of FadR in Vibrio angustum S14
| Regulator type: | Transcription factor |
| TF locus tag: | VAS14_06058 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor (activator) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Regulog: | FadR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FadR
- By taxonomy - Vibrionales
- By TF family - GntR/Others
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -89
Score: 4.6 Sequence: AACTGGTTTGTCCAGAA
Position: -74
Score: 3.6 Sequence: AACTGATCCGAGTTGTT
Locus tag: VAS14_02868
Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
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fabA
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3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
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Position: -71
Score: 4.3 Sequence: GTGAGGTCTGACCTCTA
Locus tag: VAS14_17336
Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: VAS14_17341
Name: fadJ Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
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fadI
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3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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fadJ
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Enoyl-CoA hydratase (EC 4.2.1.17)
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Position: -107
Score: 4.6 Sequence: CACTGGTCAGATTTGAT
Locus tag: VAS14_17316
Name: fadL Funciton: Long-chain fatty acid transport protein |
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fadL
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Long-chain fatty acid transport protein
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Position: -37
Score: 5.2 Sequence: TACTGGTCAGACCATAA
Locus tag: VAS14_05978
Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
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fadH
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2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
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Position: -155
Score: 5.3 Sequence: AAGTGGTAAGACCTCTT
Locus tag: VAS14_00423
Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
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fadE2
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Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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Position: -63
Score: 5.5 Sequence: AACAGGTCAAACCAGTT
Locus tag: VAS14_22297
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: VAS14_22302
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) |
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fadB
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Enoyl-CoA hydratase (EC 4.2.1.17)
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |