Regulon of FadR in Vibrio salmonicida LFI1238

Properties
Regulator type:	Transcription factor
TF locus tag:	VSAL_I2147
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 77 sites [see more]

Member of regulog collections

By trascription factor - FadR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -86 Score: 4.6 Sequence: AACTGGTTTAACCAGAG Position: -71 Score: 4.2 Sequence: AGCTGATCAGACTTGAT Locus tag: VSAL_I1556 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	VSAL_I1556	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -43 Score: 4.6 Sequence: TTGAGGTCTGACCACTA Locus tag: VSAL_I2268 Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VSAL_I2268	fadI	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -128 Score: 3.3 Sequence: TAGTGGTCGGATTTGTC Locus tag: VSAL_I2269 Name: fadL Funciton: Long-chain fatty acid transport protein
	VSAL_I2269	fadL	Long-chain fatty acid transport protein
Position: -39 Score: 5.1 Sequence: TTCTGGTCTGACCACAA Locus tag: VSAL_I2156 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	VSAL_I2156	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -33 Score: 4.7 Sequence: ATGAGGTCTGACCAGAA Locus tag: VSAL_I0834 Name: VC2105 Funciton: Thioesterase/thiol ester dehydrase-isomerase
	VSAL_I0834	VC2105	Thioesterase/thiol ester dehydrase-isomerase
Position: -114 Score: 5.3 Sequence: AACTAGTTAGACCTCTT Locus tag: VSAL_I2395 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	VSAL_I2395	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -95 Score: 4.6 Sequence: AAAAGGTTTGACCAGTT Locus tag: VSAL_I2894 Name: plsB Funciton: Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
	VSAL_I2894	plsB	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
Position: -68 Score: 4.6 Sequence: AACTGGTCAAACCAGGC Locus tag: VSAL_I2974 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: VSAL_I2973 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VSAL_I2974	fadB	Enoyl-CoA hydratase (EC 4.2.1.17)
	VSAL_I2973	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD