Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadR in Vibrio fischeri ES114

Properties
Regulator type: Transcription factor
TF locus tag: VF_1633
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Vibrionales
Statistics of regulated genes:
- Genes 9
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 77 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -128
Score: 3.2
Sequence: CAGTGGTCGGATTTGTC
Locus tag: VF_1812
Name: fadL
Funciton: Long-chain fatty acid transport protein
fadL
Long-chain fatty acid transport protein

Position: -39
Score: 4.3
Sequence: TTGAGGTCTGACCACCT
Locus tag: VF_1811
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: VF_1810
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
fadI
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadJ
Enoyl-CoA hydratase (EC 4.2.1.17)

Position: -39
Score: 5.4
Sequence: TTCTGGTCAGACCACAA
Locus tag: VF_1642
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
fadH
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)

Position: -32
Score: 4.7
Sequence: ATGAGGTCTGACCAGAA
Locus tag: VF_0811
Name: VC2105
Funciton: Thioesterase/thiol ester dehydrase-isomerase
VC2105
Thioesterase/thiol ester dehydrase-isomerase

Position: -97
Score: 5.9
Sequence: AACTGGTTAGACCTCTT
Locus tag: VF_1932
Name: fadE2
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
fadE2
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Position: -95
Score: 4.6
Sequence: AAAAGGTTTGACCAGTT
Locus tag: VF_2443
Name: plsB
Funciton: Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
plsB
Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)

Position: -68
Score: 5.6
Sequence: AACTGGTCAAACCAGAT
Locus tag: VF_0025
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: VF_0024
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadB
Enoyl-CoA hydratase (EC 4.2.1.17)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD