Regulon of FadR in Vibrio fischeri ES114

Properties
Regulator type:	Transcription factor
TF locus tag:	VF_1633
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 77 sites [see more]

Member of regulog collections

By trascription factor - FadR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -128 Score: 3.2 Sequence: CAGTGGTCGGATTTGTC Locus tag: VF_1812 Name: fadL Funciton: Long-chain fatty acid transport protein
	VF_1812	fadL	Long-chain fatty acid transport protein
Position: -39 Score: 4.3 Sequence: TTGAGGTCTGACCACCT Locus tag: VF_1811 Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: VF_1810 Name: fadJ Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	VF_1811	fadI	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VF_1810	fadJ	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -39 Score: 5.4 Sequence: TTCTGGTCAGACCACAA Locus tag: VF_1642 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	VF_1642	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -32 Score: 4.7 Sequence: ATGAGGTCTGACCAGAA Locus tag: VF_0811 Name: VC2105 Funciton: Thioesterase/thiol ester dehydrase-isomerase
	VF_0811	VC2105	Thioesterase/thiol ester dehydrase-isomerase
Position: -97 Score: 5.9 Sequence: AACTGGTTAGACCTCTT Locus tag: VF_1932 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	VF_1932	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -95 Score: 4.6 Sequence: AAAAGGTTTGACCAGTT Locus tag: VF_2443 Name: plsB Funciton: Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
	VF_2443	plsB	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
Position: -68 Score: 5.6 Sequence: AACTGGTCAAACCAGAT Locus tag: VF_0025 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: VF_0024 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VF_0025	fadB	Enoyl-CoA hydratase (EC 4.2.1.17)
	VF_0024	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD