Regulon of FadR in Vibrio splendidus LGP32

Properties
Regulator type:	Transcription factor
TF locus tag:	VS_1007
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 77 sites [see more]

Member of regulog collections

By trascription factor - FadR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -34 Score: 5.5 Sequence: TTCAGGTCAGACCTCTT Locus tag: VS_0864 Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: VS_0865 Name: fadJ Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	VS_0864	fadI	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VS_0865	fadJ	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -107 Score: 3.3 Sequence: CAATGGTCGGATTTGTA Locus tag: VS_0861 Name: fadL Funciton: Long-chain fatty acid transport protein
	VS_0861	fadL	Long-chain fatty acid transport protein
Position: -33 Score: 4.8 Sequence: TTGTGGTCTGACCACAA Locus tag: VS_0938 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	VS_0938	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -63 Score: 5.3 Sequence: GACTGGTTAGACCTCTT Locus tag: VS_2322 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	VS_2322	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -148 Score: 4.9 Sequence: AAAAGGTTAGACCAGTT Locus tag: VS_3009 Name: plsB Funciton: Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
	VS_3009	plsB	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
Position: -87 Score: 4.4 Sequence: AACTGGTCTTACCAGGT Locus tag: VS_0041 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: VS_0040 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VS_0041	fadB	Enoyl-CoA hydratase (EC 4.2.1.17)
	VS_0040	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -79 Score: 4.2 Sequence: AACTGGTTTGTCTAGTA Position: -64 Score: 4 Sequence: TACTGATCGGACTTGTT Locus tag: VS_1429 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	VS_1429	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD