Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadR in Vibrio shilonii AK1

Properties
Regulator type: Transcription factor
TF locus tag: VSAK1_03434
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Vibrionales
Statistics of regulated genes:
- Genes 9
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 77 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -31
Score: 5.2
Sequence: CTGTGGTCAGACCTCTT
Locus tag: VSAK1_03244
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: VSAK1_03249
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
fadI
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadJ
Enoyl-CoA hydratase (EC 4.2.1.17)

Position: -115
Score: 4.8
Sequence: TACTGGTCAGATTTCTA
Locus tag: VSAK1_03229
Name: fadL
Funciton: Long-chain fatty acid transport protein
fadL
Long-chain fatty acid transport protein

Position: -43
Score: 5.4
Sequence: TTCTGGTCAGACCACAA
Locus tag: VSAK1_03494
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
fadH
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)

Position: -52
Score: 4.7
Sequence: AACACGTCTGACCAGTT
Locus tag: VSAK1_10623
Name: VC2105
Funciton: Thioesterase/thiol ester dehydrase-isomerase
VC2105
Thioesterase/thiol ester dehydrase-isomerase

Position: -83
Score: 4.8
Sequence: TACTGGTACGACCTCTT
Locus tag: VSAK1_07334
Name: fadE2
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
fadE2
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Position: -132
Score: 4.7
Sequence: AAAAGGTAAGACCAGTT
Locus tag: VSAK1_12467
Name: plsB
Funciton: Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
plsB
Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)

Position: -76
Score: 5.1
Sequence: AACTGGTCTAACCAGAA
Locus tag: VSAK1_12702
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: VSAK1_12697
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadB
Enoyl-CoA hydratase (EC 4.2.1.17)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD