Regulon of FadR in Vibrio shilonii AK1

Properties
Regulator type:	Transcription factor
TF locus tag:	VSAK1_03434
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 77 sites [see more]

Member of regulog collections

By trascription factor - FadR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -31 Score: 5.2 Sequence: CTGTGGTCAGACCTCTT Locus tag: VSAK1_03244 Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: VSAK1_03249 Name: fadJ Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	VSAK1_03244	fadI	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VSAK1_03249	fadJ	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -115 Score: 4.8 Sequence: TACTGGTCAGATTTCTA Locus tag: VSAK1_03229 Name: fadL Funciton: Long-chain fatty acid transport protein
	VSAK1_03229	fadL	Long-chain fatty acid transport protein
Position: -43 Score: 5.4 Sequence: TTCTGGTCAGACCACAA Locus tag: VSAK1_03494 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	VSAK1_03494	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -52 Score: 4.7 Sequence: AACACGTCTGACCAGTT Locus tag: VSAK1_10623 Name: VC2105 Funciton: Thioesterase/thiol ester dehydrase-isomerase
	VSAK1_10623	VC2105	Thioesterase/thiol ester dehydrase-isomerase
Position: -83 Score: 4.8 Sequence: TACTGGTACGACCTCTT Locus tag: VSAK1_07334 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	VSAK1_07334	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -132 Score: 4.7 Sequence: AAAAGGTAAGACCAGTT Locus tag: VSAK1_12467 Name: plsB Funciton: Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
	VSAK1_12467	plsB	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
Position: -76 Score: 5.1 Sequence: AACTGGTCTAACCAGAA Locus tag: VSAK1_12702 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: VSAK1_12697 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VSAK1_12702	fadB	Enoyl-CoA hydratase (EC 4.2.1.17)
	VSAK1_12697	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD