Regulon of FadR in Vibrio parahaemolyticus RIMD 2210633

Properties
Regulator type:	Transcription factor
TF locus tag:	VP2071
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 77 sites [see more]

Member of regulog collections

By trascription factor - FadR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -85 Score: 4.2 Sequence: AACTGGTTTGTCTAGTA Position: -70 Score: 3.4 Sequence: TACTGATCGGAGTTGTT Locus tag: VP1591 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	VP1591	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -34 Score: 5.7 Sequence: ATCAGGTCAGACCTCTT Locus tag: VP2209 Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: VP2208 Name: fadJ Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	VP2209	fadI	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VP2208	fadJ	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -48 Score: 4.3 Sequence: GTCTGGTCAGACCATGA Locus tag: VP2151 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	VP2151	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -57 Score: 4.5 Sequence: TACAGATCTGACCAGTT Locus tag: VP0834 Name: VC2105 Funciton: Thioesterase/thiol ester dehydrase-isomerase
	VP0834	VC2105	Thioesterase/thiol ester dehydrase-isomerase
Position: -67 Score: 5.9 Sequence: AACTGGTTAGACCTCTT Locus tag: VP2289 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	VP2289	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -158 Score: 4.6 Sequence: AAAAGGTTTGACCAGTT Locus tag: VP2947 Name: plsB Funciton: Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
	VP2947	plsB	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
Position: -115 Score: 5.2 Sequence: TACTGGTCAAACCAGAA Locus tag: VP0030 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: VP0029 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VP0030	fadB	Enoyl-CoA hydratase (EC 4.2.1.17)
	VP0029	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD