Regulon of FadR in Vibrio cholerae O1 biovar eltor str. N16961

Properties
Regulator type:	Transcription factor
TF locus tag:	VC1900
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Vibrionales
Statistics of regulated genes:
- Genes	8
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 77 sites [see more]

Member of regulog collections

By trascription factor - FadR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -125 Score: 3.4 Sequence: CAATGGTCGGATTTCTA Locus tag: VC1043 Name: fadL Funciton: Long-chain fatty acid transport protein
	VC1043	fadL	Long-chain fatty acid transport protein
Position: -70 Score: 3.3 Sequence: CACTGATCGGAGTTGTT Locus tag: VC1483 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	VC1483	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -42 Score: 5.2 Sequence: TTCTGGTCAGACCATAT Locus tag: VC1993 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	VC1993	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -109 Score: 4 Sequence: AAGTGCTCTTACCAGTT Locus tag: VC2105 Name: VC2105 Funciton: Thioesterase/thiol ester dehydrase-isomerase
	VC2105	VC2105	Thioesterase/thiol ester dehydrase-isomerase
Position: -82 Score: 5.7 Sequence: AACTGGTTAGACCACTA Locus tag: VC2231 Name: fadE2 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	VC2231	fadE2	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -131 Score: 4.6 Sequence: AAAAGGTTTGACCAGTT Locus tag: VC0093 Name: plsB Funciton: Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
	VC0093	plsB	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)
Position: -76 Score: 5.4 Sequence: AACTGGTCAAACCAGAA Locus tag: VC2758 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: VC2759 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	VC2758	fadB	Enoyl-CoA hydratase (EC 4.2.1.17)
	VC2759	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD