Regulon of Zur in Vibrio parahaemolyticus RIMD 2210633
| Regulator type: | Transcription factor |
| TF locus tag: | VP2729 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Regulog: | Zur - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 7 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - Zur
- By TF family - FUR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -43
Score: 5.3 Sequence: TGAGTGTTATATTATAACACCCG
Locus tag: VP0303
Name: VC2551 Funciton: hypothetical protein
Locus tag: VP0302
Name: zbp Funciton: Predicted zinc-binding protein |
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VC2551
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hypothetical protein
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zbp
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Predicted zinc-binding protein
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Position: -41
Score: 6.9 Sequence: AAAATGTTATAACATAACAATTT
Locus tag: VP2331
Name: rpmE2 Funciton: LSU ribosomal protein L31p
Locus tag: VP2330
Name: rpmJ2 Funciton: LSU ribosomal protein L36p |
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rpmE2
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LSU ribosomal protein L31p
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rpmJ2
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LSU ribosomal protein L36p
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Position: -55
Score: 6.8 Sequence: ATAATGTTATAATGTAACATTAT
Locus tag: VP0853
Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA |
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znuA
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Zinc ABC transporter, periplasmic-binding protein ZnuA
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Position: -46
Score: 6.7 Sequence: ATAATGTTACATTATAACATTAT
Locus tag: VP0852
Name: znuC Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
Locus tag: VP0851
Name: znuB Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB |
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znuC
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Zinc ABC transporter, ATP-binding protein ZnuC
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znuB
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Zinc ABC transporter, inner membrane permease protein ZnuB
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Position: -207
Score: 6.2 Sequence: AAATTGTTATACTATAACAATTT
Locus tag: VP1921
Name: ribA Funciton: GTP cyclohydrolase II (EC 3.5.4.25) |
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ribA
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GTP cyclohydrolase II (EC 3.5.4.25)
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Position: -62
Score: 6.2 Sequence: TAATTGTTATATTATAACAACTT
Position: -33
Score: 6.3 Sequence: CATATGTTATAACATAACAATAA
Locus tag: VPA1308
Name: omr Funciton: predicted zinc-related TonB-dependent outer membrane transporter
Locus tag: VPA1307
Name: znuA2 Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA
Locus tag: VPA1306
Name: znuB2 Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB |
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omr
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predicted zinc-related TonB-dependent outer membrane transporter
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znuA2
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Zinc ABC transporter, periplasmic-binding protein ZnuA
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znuB2
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Zinc ABC transporter, inner membrane permease protein ZnuB
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Position: -43
Score: 5.3 Sequence: TGAGTGTTATATTATAACACCCG
Locus tag: VP0303
Name: VC2551 Funciton: hypothetical protein
Locus tag: VP0302
Name: zbp Funciton: Predicted zinc-binding protein
Locus tag: VP0301
Name: VV1_0719 Funciton: ABC-type antimicrobial peptide transport system, ATPase component
Locus tag: VP0300
Name: VC2554 Funciton: ABC-type antimicrobial peptide transport system, permease component
Locus tag: VP0299
Name: VC2555 Funciton: FIG003461: hypothetical protein |
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VC2551
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hypothetical protein
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zbp
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Predicted zinc-binding protein
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VV1_0719
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ABC-type antimicrobial peptide transport system, ATPase component
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VC2554
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ABC-type antimicrobial peptide transport system, permease component
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VC2555
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FIG003461: hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |