Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Zur in Vibrio harveyi ATCC BAA-1116

Properties
Regulator type: Transcription factor
TF locus tag: VIBHAR_06414, VIBHAR_00010
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Regulog: Zur - Vibrionales
Statistics of regulated genes:
- Genes 9
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 62 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -41
Score: 6.6
Sequence: ATAATGTTATAACATAACAATCA
Locus tag: VIBHAR_03250
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: VIBHAR_03249
Name: rpmJ2
Funciton: LSU ribosomal protein L36p
rpmE2
LSU ribosomal protein L31p
rpmJ2
LSU ribosomal protein L36p

Position: -154
Score: 6.6
Sequence: TAAATGTTATATTATAACAATTG
Locus tag: VIBHAR_02717
Name: ribA
Funciton: GTP cyclohydrolase II (EC 3.5.4.25)
ribA
GTP cyclohydrolase II (EC 3.5.4.25)

Position: -55
Score: 6.8
Sequence: ATAATGTTATAATGTAACATTAT
Locus tag: VIBHAR_01361
Name: znuA
Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA
znuA
Zinc ABC transporter, periplasmic-binding protein ZnuA

Position: -46
Score: 6.7
Sequence: ATAATGTTACATTATAACATTAT
Locus tag: VIBHAR_01360
Name: znuC
Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
Locus tag: VIBHAR_01359
Name: znuB
Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
znuC
Zinc ABC transporter, ATP-binding protein ZnuC
znuB
Zinc ABC transporter, inner membrane permease protein ZnuB

Position: -70
Score: 5.3
Sequence: TCTTTGTTATGTTATAACATCTG
Position: -36
Score: 4.8
Sequence: GTGGTGTAATAACATAACAAAGT
Locus tag: VIBHAR_06466
Name: omr
Funciton: predicted zinc-related TonB-dependent outer membrane transporter
Locus tag: VIBHAR_06465
Name: znuA2
Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA
Locus tag: VIBHAR_06464
Name: znuB2
Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
omr
predicted zinc-related TonB-dependent outer membrane transporter
znuA2
Zinc ABC transporter, periplasmic-binding protein ZnuA
znuB2
Zinc ABC transporter, inner membrane permease protein ZnuB
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD