Regulon of Zur in Vibrio vulnificus CMCP6
| Regulator type: | Transcription factor |
| TF locus tag: | |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Regulog: | Zur - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 7 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - Zur
- By TF family - FUR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -125
Score: 6.7 Sequence: GAAATGTTATAACATAACATTTG
Locus tag: VV1_0360
Name: omr Funciton: predicted zinc-related TonB-dependent outer membrane transporter
Locus tag: VV1_0359
Name: znuA2 Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA
Locus tag: VV1_0358
Name: znuB2 Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB |
|||
|
omr
|
predicted zinc-related TonB-dependent outer membrane transporter
|
||
|
znuA2
|
Zinc ABC transporter, periplasmic-binding protein ZnuA
|
||
|
znuB2
|
Zinc ABC transporter, inner membrane permease protein ZnuB
|
||
|
Position: -37
Score: 6.7 Sequence: AATATGTTATAACATAACAATTA
Locus tag: VV1_1840
Name: rpmE2 Funciton: LSU ribosomal protein L31p |
|||
|
rpmE2
|
LSU ribosomal protein L31p
|
||
|
Position: -144
Score: 6.1 Sequence: TTATTGTTATAATATAACAAAAC
Locus tag: VV1_2234
Name: ribA Funciton: GTP cyclohydrolase II (EC 3.5.4.25) |
|||
|
ribA
|
GTP cyclohydrolase II (EC 3.5.4.25)
|
||
|
Position: -58
Score: 6.3 Sequence: TGAGTGTTATAATGTAACATTTT
Locus tag: VV1_0151
Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA |
|||
|
znuA
|
Zinc ABC transporter, periplasmic-binding protein ZnuA
|
||
|
Position: -381
Score: 5.6 Sequence: TAGCTGTTATATTGTAACACTTT
Locus tag: VV1_0717
Name: zbp Funciton: Predicted zinc-binding protein |
|||
|
zbp
|
Predicted zinc-binding protein
|
||
|
Position: -46
Score: 6.3 Sequence: AAAATGTTACATTATAACACTCA
Locus tag: VV1_0152
Name: znuC Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
Locus tag: VV1_0153
Name: znuB Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB |
|||
|
znuC
|
Zinc ABC transporter, ATP-binding protein ZnuC
|
||
|
znuB
|
Zinc ABC transporter, inner membrane permease protein ZnuB
|
||
|
Position: -381
Score: 5.6 Sequence: TAGCTGTTATATTGTAACACTTT
Locus tag: VV1_0717
Name: zbp Funciton: Predicted zinc-binding protein
Locus tag: VV1_0719
Name: VV1_0719 Funciton: ABC-type antimicrobial peptide transport system, ATPase component
Locus tag: VV1_0720
Name: VC2554 Funciton: ABC-type antimicrobial peptide transport system, permease component
Locus tag: VV1_0721
Name: VC2555 Funciton: FIG003461: hypothetical protein |
|||
|
zbp
|
Predicted zinc-binding protein
|
||
|
VV1_0719
|
ABC-type antimicrobial peptide transport system, ATPase component
|
||
|
VC2554
|
ABC-type antimicrobial peptide transport system, permease component
|
||
|
VC2555
|
FIG003461: hypothetical protein
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |