Regulon of NrdR in Pseudomonas putida KT2440
| Regulator type: | Transcription factor |
| TF locus tag: | PP_0513 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By trascription factor - NrdR
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -375
Score: 3.8 Sequence: ACACCATATGATGTGC
Position: -343
Score: 4.7 Sequence: GCACAACATATAGGTT
Locus tag: PP1177
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) |
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nrdB
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Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
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Position: -428
Score: 3.4 Sequence: CCGCATTATCTTGTAT
Position: -397
Score: 5.6 Sequence: CCACTAGATATAGGGG
Locus tag: PP1179
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) |
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nrdA
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Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
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Position: -73
Score: 5.7 Sequence: CCACTATATATAGCGG
Locus tag: PP2139
Name: topA Funciton: DNA topoisomerase I (EC 5.99.1.2) |
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topA
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DNA topoisomerase I (EC 5.99.1.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |