Regulon of BirA in Pseudomonas mendocina ymp

Properties
Regulator type:	Transcription factor
TF locus tag:	Pmen_3926
Regulator family:	BirA
Regulation mode:	repressor
Biological process:	Biotin biosynthesis
Effector:	Biotin
Regulog:	BirA - Pseudomonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 15 sites [see more]

Member of regulog collections

By trascription factor - BirA
By taxonomy - Pseudomonadaceae
By TF family - BirA
By effector - Biotin
By pathway - Biotin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -119 Score: 8.2 Sequence: TCGTCAACC-(14)-GGTTGACAG Locus tag: Pmen_4088 Name: bioB Funciton: Biotin synthase (EC 2.8.1.6) Locus tag: Pmen_4087 Name: bioF Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Locus tag: Pmen_4086 Name: bioH Funciton: hypothetical protein Locus tag: Pmen_4085 Name: bioC Funciton: Biotin synthesis protein bioC
	Pmen_4088	bioB	Biotin synthase (EC 2.8.1.6)
	Pmen_4087	bioF	8-amino-7-oxononanoate synthase (EC 2.3.1.47)
	Pmen_4086	bioH	hypothetical protein
	Pmen_4085	bioC	Biotin synthesis protein bioC
Position: -107 Score: 8.2 Sequence: CTGTCAACC-(14)-GGTTGACGA Locus tag: Pmen_4089 Name: null Funciton: Permeases of the major facilitator superfamily Locus tag: Pmen_4090 Name: COG1040 Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
	Pmen_4089		Permeases of the major facilitator superfamily
	Pmen_4090	COG1040	Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy

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