Profile of regulator BirA in Pseudomonadaceae
Properties
| Regulator family: |
BirA |
| Regulation mode: |
repressor |
| Biological process: |
Biotin biosynthesis |
| Effector: |
Biotin |
| Regulog: |
BirA - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA0500 |
bioB |
-129 |
7.5 |
ATGTAGTCC-(14)-GGTTGACAG |
|
Pseudomonas entomophila L48
|
|
PSEEN5121 |
bioB |
-127 |
8.1 |
TTGTAAGCC-(15)-GGTTGACAG |
|
PSEEN5122 |
COG1040 |
5 |
8.1 |
CTGTCAACC-(15)-GGCTTACAA |
|
Pseudomonas putida KT2440
|
|
PP0362 |
bioB |
-127 |
8.6 |
TTGTAAACC-(15)-AGTTGACAG |
|
PP0361 |
COG1040 |
5 |
8.6 |
CTGTCAACT-(15)-GGTTTACAA |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO0494 |
bioB |
-128 |
8.8 |
ATGTAAACC-(15)-GGTTGACAG |
|
PSPTO0493 |
COG1040 |
5 |
8.8 |
CTGTCAACC-(15)-GGTTTACAT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_5693 |
bioB |
-128 |
8.8 |
ATGTAAACC-(15)-GGTTGACAG |
|
PFL_5694 |
COG1040 |
5 |
8.8 |
CTGTCAACC-(15)-GGTTTACAT |
|
Pseudomonas mendocina ymp
|
|
Pmen_4089 |
null |
-107 |
8.2 |
CTGTCAACC-(14)-GGTTGACGA |
|
Pmen_4088 |
bioB |
-119 |
8.2 |
TCGTCAACC-(14)-GGTTGACAG |
|
Pseudomonas stutzeri A1501
|
|
PST_3867 |
COG1040 |
-21 |
9 |
CTGTCAACC-(14)-GGTTTACAA |
|
PST_3866 |
bioB |
-104 |
9 |
TTGTAAACC-(14)-GGTTGACAG |
|
Azotobacter vinelandii AvOP
|
|
Avin_05970 |
COG1040 |
-16 |
9 |
CTGTCAACC-(15)-GGTTTACAA |
|
Avin_05980 |
bioB |
-139 |
9 |
TTGTAAACC-(15)-GGTTGACAG |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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