Regulon of BirA in Pseudomonas fluorescens Pf-5
| Regulator type: | Transcription factor |
| TF locus tag: | PFL_5601 |
| Regulator family: | BirA |
| Regulation mode: | repressor |
| Biological process: | Biotin biosynthesis |
| Effector: | Biotin |
| Regulog: | BirA - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - BirA
- By taxonomy - Pseudomonadaceae
- By TF family - BirA
- By effector - Biotin
- By pathway - Biotin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: 5
Score: 8.8 Sequence: CTGTCAACC-(15)-GGTTTACAT
Locus tag: PFL_5694
Name: COG1040 Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy |
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COG1040
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Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
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Position: -128
Score: 8.8 Sequence: ATGTAAACC-(15)-GGTTGACAG
Locus tag: PFL_5693
Name: bioB Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PFL_5692
Name: bioF Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PFL_5691
Name: bioH Funciton: hypothetical protein
Locus tag: PFL_5690
Name: bioC Funciton: Biotin synthesis protein bioC
Locus tag: PFL_5689
Name: bioD Funciton: Dethiobiotin synthetase (EC 6.3.3.3) |
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bioB
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Biotin synthase (EC 2.8.1.6)
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bioF
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8-amino-7-oxononanoate synthase (EC 2.3.1.47)
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bioH
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hypothetical protein
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bioC
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Biotin synthesis protein bioC
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bioD
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Dethiobiotin synthetase (EC 6.3.3.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |