Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of BirA in Pseudomonas syringae pv. tomato str. DC3000

Properties
Regulator type: Transcription factor
TF locus tag: PSPTO0610
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Regulog: BirA - Pseudomonadaceae
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -128
Score: 8.8
Sequence: ATGTAAACC-(15)-GGTTGACAG
Locus tag: PSPTO0494
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PSPTO0495
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PSPTO0496
Name: bioH
Funciton: hypothetical protein
Locus tag: PSPTO0497
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: PSPTO0498
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB
Biotin synthase (EC 2.8.1.6)
bioF
8-amino-7-oxononanoate synthase (EC 2.3.1.47)
bioH
hypothetical protein
bioC
Biotin synthesis protein bioC
bioD
Dethiobiotin synthetase (EC 6.3.3.3)

Position: 5
Score: 8.8
Sequence: CTGTCAACC-(15)-GGTTTACAT
Locus tag: PSPTO0493
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
COG1040
Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
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