Regulon of BirA in Alteromonas macleodii 'Deep ecotype'

Properties
Regulator type:	Transcription factor
TF locus tag:	MADE_03573
Regulator family:	BirA
Regulation mode:	repressor
Biological process:	Biotin biosynthesis
Effector:	Biotin
Regulog:	BirA - Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - BirA
By TF family - BirA
By effector - Biotin
By pathway - Biotin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -18 Score: 6.9 Sequence: TTGTcAACt-(15)-ccTTTACcA Locus tag: MADE_02212 Name: bioA Funciton: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
	MADE_02212	bioA	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
Position: -86 Score: 6.9 Sequence: TgGTAAAgg-(15)-aGTTgACAA Locus tag: MADE_02211 Name: bioB Funciton: Biotin synthase (EC 2.8.1.6) Locus tag: MADE_02210 Name: bioF Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Locus tag: MADE_02209 Name: bioC Funciton: Biotin biosynthesis protein BioC Locus tag: MADE_02208 Name: bioD Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
	MADE_02211	bioB	Biotin synthase (EC 2.8.1.6)
	MADE_02210	bioF	8-amino-7-oxononanoate synthase (EC 2.3.1.47)
	MADE_02209	bioC	Biotin biosynthesis protein BioC
	MADE_02208	bioD	Dethiobiotin synthetase (EC 6.3.3.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD