Profile of regulator BirA in Alteromonadales
Properties
| Regulator family: |
BirA |
| Regulation mode: |
repressor |
| Biological process: |
Biotin biosynthesis |
| Effector: |
Biotin |
| Regulog: |
BirA - Alteromonadales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudoalteromonas atlantica T6c
|
|
Patl_2558 |
bioA |
-44 |
7.6 |
TTGTCAACT-(15)-ACTTTACAA |
|
Patl_2557 |
bioB |
-87 |
7.6 |
TTGTAAAGT-(15)-AGTTGACAA |
|
Alteromonas macleodii 'Deep ecotype'
|
|
MADE_02211 |
bioB |
-86 |
6.9 |
TgGTAAAgg-(15)-aGTTgACAA |
|
MADE_02212 |
bioA |
-18 |
6.9 |
TTGTcAACt-(15)-ccTTTACcA |
|
Glaciecola sp. HTCC2999
|
|
GHTCC_010100004703 |
bioA |
-44 |
8.7 |
TTGTCAACC-(15)-AGTTTACAA |
|
GHTCC_010100004698 |
bioB |
-92 |
8.7 |
TTGTAAACT-(15)-GGTTGACAA |
|
Colwellia psychrerythraea 34H
|
|
CPS_2593 |
bioA |
-33 |
7.7 |
ATGTCAACG-(15)-GGTTAACAA |
|
CPS_2594 |
bioB |
-87 |
7.7 |
TTGTTAACC-(15)-CGTTGACAT |
|
Alteromonadales bacterium TW-7
|
|
ATW7_13078 |
bioA |
-34 |
8 |
TTGTCAACG-(16)-AGTTTACAT |
|
ATW7_13073 |
bioB |
-95 |
8 |
ATGTAAACT-(16)-CGTTGACAA |
|
Pseudoalteromonas haloplanktis TAC125
|
|
PSHAa1609 |
bioB |
-99 |
8 |
ATGTAAACT-(16)-CGTTGACAA |
|
Pseudoalteromonas tunicata D2
|
|
PTD2_19562 |
bioA |
-34 |
7.9 |
TTGTCAACA-(16)-AGTTTACAT |
|
PTD2_19567 |
bioB |
-95 |
7.9 |
ATGTAAACT-(16)-TGTTGACAA |
|
Idiomarina baltica OS145
|
|
OS145_05987 |
bioA |
-44 |
6.8 |
CTGTCAATT-(15)-ACTTTACAA |
|
OS145_05992 |
bioB |
-95 |
6.8 |
TTGTAAAGT-(15)-AATTGACAG |
|
Idiomarina loihiensis L2TR
|
|
IL1324 |
bioB |
-89 |
6.6 |
TTGTAAAgt-(15)-taTTgACAg |
|
IL1325 |
bioA |
-45 |
6.6 |
cTGTcAAta-(15)-acTTTACAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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