Profile of regulator BirA in Alteromonadales

Member of regulog collections

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Pseudoalteromonas atlantica T6c
	Patl_2558	bioA	-44	7.6	TTGTCAACT-(15)-ACTTTACAA
	Patl_2557	bioB	-87	7.6	TTGTAAAGT-(15)-AGTTGACAA
Alteromonas macleodii 'Deep ecotype'
	MADE_02211	bioB	-86	6.9	TgGTAAAgg-(15)-aGTTgACAA
	MADE_02212	bioA	-18	6.9	TTGTcAACt-(15)-ccTTTACcA
Glaciecola sp. HTCC2999
	GHTCC_010100004703	bioA	-44	8.7	TTGTCAACC-(15)-AGTTTACAA
	GHTCC_010100004698	bioB	-92	8.7	TTGTAAACT-(15)-GGTTGACAA
Colwellia psychrerythraea 34H
	CPS_2593	bioA	-33	7.7	ATGTCAACG-(15)-GGTTAACAA
	CPS_2594	bioB	-87	7.7	TTGTTAACC-(15)-CGTTGACAT
Alteromonadales bacterium TW-7
	ATW7_13078	bioA	-34	8	TTGTCAACG-(16)-AGTTTACAT
	ATW7_13073	bioB	-95	8	ATGTAAACT-(16)-CGTTGACAA
Pseudoalteromonas haloplanktis TAC125
	PSHAa1609	bioB	-99	8	ATGTAAACT-(16)-CGTTGACAA
Pseudoalteromonas tunicata D2
	PTD2_19562	bioA	-34	7.9	TTGTCAACA-(16)-AGTTTACAT
	PTD2_19567	bioB	-95	7.9	ATGTAAACT-(16)-TGTTGACAA
Idiomarina baltica OS145
	OS145_05987	bioA	-44	6.8	CTGTCAATT-(15)-ACTTTACAA
	OS145_05992	bioB	-95	6.8	TTGTAAAGT-(15)-AATTGACAG
Idiomarina loihiensis L2TR
	IL1324	bioB	-89	6.6	TTGTAAAgt-(15)-taTTgACAg
	IL1325	bioA	-45	6.6	cTGTcAAta-(15)-acTTTACAA

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --