Regulon of BirA in Pseudoalteromonas atlantica T6c

Properties
Regulator type:	Transcription factor
TF locus tag:	Patl_3998
Regulator family:	BirA
Regulation mode:	repressor
Biological process:	Biotin biosynthesis
Effector:	Biotin
Regulog:	BirA - Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - BirA
By TF family - BirA
By effector - Biotin
By pathway - Biotin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -44 Score: 7.6 Sequence: TTGTCAACT-(15)-ACTTTACAA Locus tag: Patl_2558 Name: bioA Funciton: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
	Patl_2558	bioA	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
Position: -87 Score: 7.6 Sequence: TTGTAAAGT-(15)-AGTTGACAA Locus tag: Patl_2557 Name: bioB Funciton: Biotin synthase (EC 2.8.1.6) Locus tag: Patl_2556 Name: bioF Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Locus tag: Patl_2555 Name: bioC Funciton: Biotin biosynthesis protein BioC Locus tag: Patl_2554 Name: bioD Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
	Patl_2557	bioB	Biotin synthase (EC 2.8.1.6)
	Patl_2556	bioF	8-amino-7-oxononanoate synthase (EC 2.3.1.47)
	Patl_2555	bioC	Biotin biosynthesis protein BioC
	Patl_2554	bioD	Dethiobiotin synthetase (EC 6.3.3.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD